Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS13125

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,875,354	-				-1.6
2,875,404	+				-0.5
2,875,438	+				+0.2
2,875,438	+				-1.3
2,875,438	+				-0.9
2,875,439	-				-0.4
2,875,439	-				-0.8
2,875,439	-				-1.5
2,875,439	-				+0.0
2,875,439	-				+0.1
2,875,470	+				-0.6
2,875,471	-				-0.5
2,875,471	-				-0.1
2,875,536	+				-1.1
2,875,590	+				+1.3
2,875,590	+				+2.1
2,875,666	-		HGI48_RS13120	0.20	-1.1
2,875,666	-		HGI48_RS13120	0.20	-0.3
2,875,918	+		HGI48_RS13120	0.49	-0.2
2,875,918	+				-0.1
2,875,968	+				+0.5
2,876,267	+				-0.1
2,876,267	+				+0.1
2,876,267	+				-0.8
2,876,267	+				+0.2
2,876,438	-		HGI48_RS13125	0.19	-2.1
2,877,009	-		HGI48_RS13130	0.17	+0.3
2,877,009	-		HGI48_RS13130	0.17	-0.1
2,877,079	+		HGI48_RS13130	0.35	-0.6
2,877,079	+		HGI48_RS13130	0.35	-0.8
2,877,079	+		HGI48_RS13130	0.35	-0.5
2,877,080	-				-0.1
2,877,085	+		HGI48_RS13130	0.37	+0.2
2,877,122	+				-0.5
2,877,122	+		HGI48_RS13130	0.47	-1.0
2,877,122	+		HGI48_RS13130	0.47	+0.1
2,877,123	-		HGI48_RS13130	0.47	+0.2
2,877,123	-		HGI48_RS13130	0.47	-0.5
2,877,239	+		HGI48_RS13130	0.77	-0.1
2,877,318	+				-0.9
2,877,327	-				-2.9
2,877,381	+		HGI48_RS13135	0.13	+0.5
2,877,381	+		HGI48_RS13135	0.13	-0.1
2,877,381	+				+0.9
2,877,381	+				-0.1
2,877,382	-		HGI48_RS13135	0.14	-0.5
2,877,382	-		HGI48_RS13135	0.14	-0.2
2,877,392	+		HGI48_RS13135	0.17	-1.1
2,877,392	+		HGI48_RS13135	0.17	+0.0
2,877,393	-		HGI48_RS13135	0.17	+0.8
2,877,393	-		HGI48_RS13135	0.17	-1.4
2,877,393	-		HGI48_RS13135	0.17	+0.2
2,877,393	-		HGI48_RS13135	0.17	-0.3
2,877,393	-		HGI48_RS13135	0.17	-2.1
2,877,567	+		HGI48_RS13135	0.66	-1.1
2,877,568	-		HGI48_RS13135	0.67	+0.5
2,877,568	-		HGI48_RS13135	0.67	-0.0
2,877,631	-		HGI48_RS13135	0.85	-0.1
2,877,684	+				-0.1
2,877,700	-				-0.5
2,877,734	-				+1.7
2,877,734	-				+0.1
2,877,742	+				-1.1
2,877,743	-				-0.8
2,877,782	-				-0.8