Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS13115

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,873,445	+				+0.5
2,873,446	-				+0.8
2,873,649	+				-2.5
2,873,649	+				+0.5
2,873,651	+				+0.3
2,873,652	-				-2.7
2,873,665	-				-0.7
2,873,720	+				-1.0
2,873,720	+				+0.4
2,873,735	+				-1.1
2,873,743	+				-1.2
2,873,771	-				-0.1
2,873,899	+				-0.1
2,873,899	+				-1.1
2,873,943	+		HGI48_RS13110	0.17	-1.6
2,873,944	-				+0.5
2,873,944	-		HGI48_RS13110	0.17	-1.1
2,873,944	-				-0.5
2,873,946	+		HGI48_RS13110	0.17	+0.1
2,873,947	-				+1.1
2,874,013	+		HGI48_RS13110	0.30	-0.2
2,874,014	-		HGI48_RS13110	0.30	+1.2
2,874,072	+		HGI48_RS13110	0.41	-1.5
2,874,073	-		HGI48_RS13110	0.41	-0.7
2,874,295	-				+1.7
2,874,384	+				-0.8
2,874,385	-				-0.2
2,874,385	-				-1.8
2,874,431	+				-1.1
2,874,432	-				-0.1
2,874,545	+		HGI48_RS13115	0.11	+0.1
2,874,546	-		HGI48_RS13115	0.11	-1.8
2,874,565	+		HGI48_RS13115	0.13	+0.3
2,874,762	+		HGI48_RS13115	0.32	-1.5
2,874,809	+		HGI48_RS13115	0.37	+0.5
2,874,810	-		HGI48_RS13115	0.37	+0.5
2,874,876	+		HGI48_RS13115	0.43	-0.5
2,874,999	+		HGI48_RS13115	0.55	+0.2
2,875,000	-		HGI48_RS13115	0.56	+0.8
2,875,009	-		HGI48_RS13115	0.56	+0.2
2,875,354	-				-1.6
2,875,404	+				-0.5
2,875,438	+				+0.2
2,875,438	+				-1.3
2,875,438	+				-0.9
2,875,439	-				-0.4
2,875,439	-				-0.8
2,875,439	-				-1.5
2,875,439	-				+0.0
2,875,439	-				+0.1
2,875,470	+				-0.6
2,875,471	-				-0.5
2,875,471	-				-0.1
2,875,536	+				-1.1
2,875,590	+				+1.3
2,875,590	+				+2.1
2,875,666	-		HGI48_RS13120	0.20	-1.1
2,875,666	-		HGI48_RS13120	0.20	-0.3
2,875,918	+		HGI48_RS13120	0.49	-0.2
2,875,918	+				-0.1
2,875,968	+				+0.5
2,876,267	+				-0.1
2,876,267	+				+0.1
2,876,267	+				-0.8
2,876,267	+				+0.2
2,876,438	-		HGI48_RS13125	0.19	-2.1