Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS12305

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,683,144	+		HGI48_RS12300	0.66	-1.8
2,683,144	+		HGI48_RS12300	0.66	+0.0
2,683,145	-		HGI48_RS12300	0.66	+1.1
2,683,171	+		HGI48_RS12300	0.70	-0.7
2,683,171	+		HGI48_RS12300	0.70	-1.1
2,683,171	+				+1.5
2,683,336	+				-0.8
2,683,337	-				-0.6
2,683,337	-				+0.9
2,683,373	+				-2.3
2,683,389	+				-1.1
2,683,476	+				-1.8
2,683,553	+				+1.1
2,683,554	-				-0.1
2,683,943	+				+0.5
2,683,943	+				+0.0
2,683,943	+				-0.2
2,683,943	+				-1.5
2,683,945	+				-0.7
2,683,946	-				-0.1
2,684,002	+				-1.5
2,684,002	+				+0.7
2,684,003	-				-1.5
2,684,003	-				+0.3
2,684,503	+		HGI48_RS12305	0.49	+0.3
2,684,504	-		HGI48_RS12305	0.49	-0.7
2,684,795	+		HGI48_RS12305	0.76	-0.8
2,685,120	-				-1.8
2,685,168	-				+1.4
2,685,197	+				+0.5
2,685,197	+				+1.2
2,685,198	-				+0.2
2,685,413	+				+1.0
2,685,413	+				-0.5
2,685,413	+				+2.7
2,685,413	+				+0.0
2,685,442	+				+0.2
2,685,443	-				+0.8
2,685,521	+		HGI48_RS12310	0.10	+0.0
2,685,530	+		HGI48_RS12310	0.11	+0.5
2,685,530	+		HGI48_RS12310	0.11	-0.2
2,685,530	+		HGI48_RS12310	0.11	-1.5
2,685,530	+		HGI48_RS12310	0.11	+0.1
2,685,531	-		HGI48_RS12310	0.11	+0.2
2,685,646	+		HGI48_RS12310	0.18	+0.5
2,685,647	-		HGI48_RS12310	0.18	+0.5
2,685,647	-		HGI48_RS12310	0.18	+0.5
2,685,731	+		HGI48_RS12310	0.23	-0.8
2,685,731	+		HGI48_RS12310	0.23	+0.6
2,685,732	-		HGI48_RS12310	0.23	-0.6
2,685,732	-		HGI48_RS12310	0.23	+0.2
2,685,760	+		HGI48_RS12310	0.24	+0.2
2,685,761	-				-1.1
2,685,799	-		HGI48_RS12310	0.27	-1.1
2,685,842	+		HGI48_RS12310	0.29	-0.5
2,685,842	+		HGI48_RS12310	0.29	+0.8
2,685,842	+		HGI48_RS12310	0.29	+0.1
2,685,842	+		HGI48_RS12310	0.29	-0.2
2,685,868	-		HGI48_RS12310	0.31	-0.8
2,685,933	+		HGI48_RS12310	0.34	-0.5