Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS11960

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,607,586	+		HGI48_RS11950	0.50	-1.4
2,607,597	+		HGI48_RS11950	0.55	+0.5
2,607,597	+		HGI48_RS11950	0.55	-1.5
2,607,597	+		HGI48_RS11950	0.55	-0.4
2,607,598	-		HGI48_RS11950	0.55	-1.0
2,607,686	+				-0.5
2,607,686	+				-0.1
2,607,686	+				-0.0
2,607,729	-				-1.6
2,607,742	-				-1.1
2,607,747	-				-0.5
2,607,747	-				-1.3
2,607,847	+				-1.4
2,607,847	+				-1.9
2,607,847	+				-2.3
2,607,847	+				-1.1
2,607,906	+				+0.3
2,607,906	+				-0.0
2,607,906	+				-0.9
2,607,906	+				+0.9
2,607,906	+				-0.7
2,607,906	+				+0.8
2,607,906	+				-0.1
2,607,906	+				-0.8
2,607,907	-				-0.1
2,607,907	-				+1.2
2,607,907	-				-0.9
2,607,907	-				+0.5
2,607,907	-				+0.2
2,607,946	-				+0.9
2,608,012	+				-1.5
2,608,012	+				+0.5
2,608,012	+				-0.3
2,608,012	+				-0.4
2,608,012	+				-1.9
2,608,012	+				-0.2
2,608,012	+				-1.5
2,608,012	+				+0.2
2,608,013	-				+0.2
2,608,013	-				-1.5
2,608,013	-				+0.0
2,608,070	-				+0.8
2,608,150	+		HGI48_RS11955	0.18	-1.5
2,608,151	-		HGI48_RS11955	0.19	-0.0
2,608,221	+		HGI48_RS11955	0.37	+0.0
2,608,221	+		HGI48_RS11955	0.37	-0.1
2,608,221	+		HGI48_RS11955	0.37	-1.1
2,608,221	+		HGI48_RS11955	0.37	-0.3
2,608,221	+		HGI48_RS11955	0.37	-0.0
2,608,221	+		HGI48_RS11955	0.37	+0.0
2,608,222	-				+1.0
2,608,222	-		HGI48_RS11955	0.37	+1.0
2,608,222	-		HGI48_RS11955	0.37	+0.9
2,608,222	-		HGI48_RS11955	0.37	-0.9
2,608,222	-		HGI48_RS11955	0.37	-0.7
2,608,222	-		HGI48_RS11955	0.37	-1.5
2,608,222	-		HGI48_RS11955	0.37	+0.0
2,608,222	-		HGI48_RS11955	0.37	-1.5
2,608,222	-		HGI48_RS11955	0.37	-0.4
2,608,222	-		HGI48_RS11955	0.37	-0.5
2,608,222	-		HGI48_RS11955	0.37	-0.5
2,608,222	-		HGI48_RS11955	0.37	+0.0
2,608,222	-		HGI48_RS11955	0.37	+0.2
2,608,222	-				-0.1
2,608,225	+		HGI48_RS11955	0.38	-0.5
2,608,225	+		HGI48_RS11955	0.38	+0.1
2,608,225	+		HGI48_RS11955	0.38	-1.3
2,608,225	+		HGI48_RS11955	0.38	-2.5
2,608,225	+		HGI48_RS11955	0.38	-2.5
2,608,225	+		HGI48_RS11955	0.38	-0.5
2,608,226	-		HGI48_RS11955	0.38	+0.0
2,608,226	-		HGI48_RS11955	0.38	+0.0
2,608,226	-		HGI48_RS11955	0.38	+0.3
2,608,226	-		HGI48_RS11955	0.38	+0.4
2,608,226	-		HGI48_RS11955	0.38	-0.8
2,608,226	-				+1.7
2,608,226	-		HGI48_RS11955	0.38	-1.3
2,608,449	+				-1.5
2,608,450	-				+1.0
2,608,477	-				+0.0
2,608,487	+				-0.0
2,608,691	+		HGI48_RS11960	0.18	+0.3
2,608,691	+				+0.5
2,608,691	+		HGI48_RS11960	0.18	+0.1
2,608,692	-		HGI48_RS11960	0.18	+0.7
2,608,692	-				+1.2
2,608,692	-				+0.5
2,608,742	+		HGI48_RS11960	0.24	+0.9
2,608,758	+		HGI48_RS11960	0.26	+0.2
2,608,808	+		HGI48_RS11960	0.31	-0.9
2,608,809	-		HGI48_RS11960	0.32	-2.0
2,608,857	+		HGI48_RS11960	0.37	-0.0
2,608,858	-		HGI48_RS11960	0.37	-0.9
2,608,858	-		HGI48_RS11960	0.37	-1.5
2,608,884	+		HGI48_RS11960	0.40	-1.1
2,608,884	+		HGI48_RS11960	0.40	-0.1
2,608,885	-				+1.0
2,608,885	-		HGI48_RS11960	0.40	+0.7
2,608,885	-		HGI48_RS11960	0.40	-2.3
2,609,101	+		HGI48_RS11960	0.64	-0.9
2,609,102	-		HGI48_RS11960	0.64	-0.4
2,609,126	+		HGI48_RS11960	0.67	+0.5
2,609,423	+				-2.1
2,609,709	+		HGI48_RS11965	0.25	-0.5
2,609,710	-		HGI48_RS11965	0.25	+0.5
2,609,710	-		HGI48_RS11965	0.25	+0.2
2,609,710	-				+1.5
2,609,710	-		HGI48_RS11965	0.25	-2.2
2,609,876	+		HGI48_RS11965	0.50	+0.5
2,609,877	-		HGI48_RS11965	0.50	-0.3
2,609,877	-		HGI48_RS11965	0.50	-1.5
2,609,877	-		HGI48_RS11965	0.50	+0.1
2,609,879	+		HGI48_RS11965	0.51	-1.2
2,609,880	-		HGI48_RS11965	0.51	-0.5
2,609,880	-		HGI48_RS11965	0.51	-2.1
2,609,891	+		HGI48_RS11965	0.53	+0.2
2,609,891	+		HGI48_RS11965	0.53	-0.3
2,609,892	-		HGI48_RS11965	0.53	-0.1
2,609,892	-		HGI48_RS11965	0.53	+0.5
2,610,204	+				+0.1
2,610,204	+				+0.0
2,610,204	+				-0.5
2,610,204	+				-0.3
2,610,205	-				-0.1
2,610,208	+				+0.9
2,610,208	+				+0.5
2,610,208	+				-0.5
2,610,208	+				+0.4
2,610,209	-				-0.3
2,610,212	+				-1.0
2,610,212	+				+0.2
2,610,212	+				+0.5
2,610,212	+				-1.4
2,610,212	+				+0.5
2,610,212	+				+0.4
2,610,212	+				-2.1
2,610,213	-				-0.5
2,610,213	-				-1.0
2,610,213	-				-0.2
2,610,213	-				+0.0
2,610,229	+				+0.1
2,610,229	+				-0.3
2,610,230	-				+0.4
2,610,234	-				-2.1
2,610,264	-				+0.5
2,610,328	+				+0.2
2,610,329	-				-1.5
2,610,329	-				+0.1
2,610,329	-				-0.5
2,610,329	-				+0.5
2,610,329	-				-1.3
2,610,349	+				-2.1
2,610,392	+				+0.0
2,610,393	-				+0.1
2,610,393	-				+1.0
2,610,393	-				-2.4
2,610,393	-				+1.5
2,610,412	+				+1.0