Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS11865

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,591,493	-		HGI48_RS11860	0.39	-0.1
2,591,493	-		HGI48_RS11860	0.39	-0.9
2,591,495	+		HGI48_RS11860	0.40	-0.4
2,591,495	+		HGI48_RS11860	0.40	+0.1
2,591,496	-		HGI48_RS11860	0.40	-0.5
2,591,496	-		HGI48_RS11860	0.40	+0.2
2,591,496	-				+0.9
2,591,619	+		HGI48_RS11860	0.49	+0.3
2,591,620	-		HGI48_RS11860	0.50	+1.3
2,591,620	-		HGI48_RS11860	0.50	-0.5
2,592,005	+		HGI48_RS11860	0.80	-0.2
2,592,005	+		HGI48_RS11860	0.80	-0.4
2,592,005	+				+0.9
2,592,006	-		HGI48_RS11860	0.80	+0.2
2,592,006	-		HGI48_RS11860	0.80	-0.3
2,592,006	-		HGI48_RS11860	0.80	-0.7
2,592,132	+				+0.9
2,592,133	-				-0.1
2,592,134	+				-0.0
2,592,134	+				+0.5
2,592,134	+				+1.5
2,592,135	-				-0.0
2,592,135	-				+2.0
2,592,253	-				-0.6
2,592,324	+				-0.8
2,592,324	+				-0.4
2,592,325	-				-0.3
2,592,328	+				+0.1
2,592,329	-				-0.5
2,592,395	+				-0.2
2,592,396	-				+0.5
2,592,407	+				+1.7
2,592,461	-				+0.7
2,592,561	+		HGI48_RS11865	0.12	-0.3
2,592,561	+		HGI48_RS11865	0.12	-0.1
2,592,601	+		HGI48_RS11865	0.15	+0.0
2,592,602	-		HGI48_RS11865	0.15	-0.9
2,592,602	-		HGI48_RS11865	0.15	-0.5
2,592,602	-		HGI48_RS11865	0.15	-0.4
2,592,602	-		HGI48_RS11865	0.15	-1.4
2,592,602	-		HGI48_RS11865	0.15	+0.5
2,592,604	-		HGI48_RS11865	0.15	-2.4
2,592,631	+		HGI48_RS11865	0.17	+0.3
2,592,631	+		HGI48_RS11865	0.17	-1.4
2,592,631	+		HGI48_RS11865	0.17	-0.6
2,592,631	+		HGI48_RS11865	0.17	+0.1
2,592,632	-		HGI48_RS11865	0.17	-2.1
2,592,632	-		HGI48_RS11865	0.17	+0.5
2,592,877	+		HGI48_RS11865	0.33	-0.8
2,592,877	+		HGI48_RS11865	0.33	-0.3
2,592,878	-				-0.1
2,592,925	+		HGI48_RS11865	0.36	-1.7
2,593,060	+		HGI48_RS11865	0.45	-0.8
2,593,291	+		HGI48_RS11865	0.61	-1.3
2,593,292	-		HGI48_RS11865	0.61	-0.1
2,593,367	-		HGI48_RS11865	0.66	-0.5
2,593,414	+		HGI48_RS11865	0.69	-0.1
2,593,414	+		HGI48_RS11865	0.69	-0.9
2,593,415	-		HGI48_RS11865	0.69	-2.1
2,593,415	-		HGI48_RS11865	0.69	+0.5
2,593,415	-		HGI48_RS11865	0.69	+0.2
2,593,415	-		HGI48_RS11865	0.69	-1.9
2,593,415	-		HGI48_RS11865	0.69	-0.1
2,593,415	-				+1.0
2,593,415	-		HGI48_RS11865	0.69	-1.2
2,593,415	-		HGI48_RS11865	0.69	-0.9
2,593,415	-		HGI48_RS11865	0.69	-1.5
2,593,469	+		HGI48_RS11865	0.73	+0.0
2,593,470	-		HGI48_RS11865	0.73	+0.0
2,593,499	+		HGI48_RS11865	0.75	-0.9
2,593,500	-		HGI48_RS11865	0.75	+0.3
2,593,500	-		HGI48_RS11865	0.75	-0.1
2,593,565	-		HGI48_RS11865	0.79	-1.4
2,593,621	+		HGI48_RS11865	0.83	-0.9
2,593,621	+		HGI48_RS11865	0.83	-2.5
2,593,621	+		HGI48_RS11865	0.83	+0.3
2,593,622	-		HGI48_RS11865	0.83	-2.9
2,593,631	-		HGI48_RS11865	0.84	-0.5
2,593,631	-		HGI48_RS11865	0.84	+0.6
2,593,639	-		HGI48_RS11865	0.84	+0.1
2,593,704	+		HGI48_RS11865	0.89	-2.4
2,593,705	-		HGI48_RS11865	0.89	-0.8
2,593,744	+				+0.1
2,593,744	+				+0.5
2,593,744	+				-2.0
2,593,745	-				-0.5
2,593,747	+				-1.5
2,593,747	+				+1.1
2,593,748	-				-2.1
2,593,844	+				+0.8
2,593,912	+				-0.4
2,593,912	+				+0.5
2,593,912	+				-0.3
2,593,913	-				+1.2
2,593,916	+				-0.7
2,593,917	-				-0.4
2,593,917	-				+0.7
2,593,917	-				-0.8
2,593,929	+				-0.1
2,593,930	-				-1.1
2,593,946	+				-1.1
2,593,946	+				+0.8
2,593,946	+				-0.5
2,593,947	-				+0.1
2,593,963	+				-0.8
2,593,963	+				-0.9
2,593,963	+				-0.4
2,593,963	+				-1.5
2,593,964	-				+0.3
2,593,964	-				+0.8
2,593,964	-				-1.9
2,593,967	+				+0.2
2,593,968	-				-0.5
2,594,028	+				-0.5
2,594,028	+				-1.1
2,594,029	-				-0.3
2,594,033	-				+0.9
2,594,079	+				+0.9
2,594,079	+				+0.6
2,594,080	-				+0.5
2,594,080	-				-0.9
2,594,093	+				-0.8
2,594,114	+				+2.2
2,594,152	-				-0.1
2,594,194	+				-2.5
2,594,242	-				-0.5
2,594,242	-				+0.9
2,594,259	-				+1.0
2,594,259	-				-1.1
2,594,259	-				-1.1
2,594,259	-				-2.7
2,594,264	+				+0.0
2,594,265	-				-1.3
2,594,265	-				-0.8
2,594,268	+				+1.3
2,594,269	-				+0.6
2,594,269	-				-1.1
2,594,320	+				+1.0
2,594,321	-				-0.7
2,594,566	+				+1.0
2,594,567	-		HGI48_RS11870	0.23	-1.5
2,594,871	+		HGI48_RS11870	0.51	-0.4
2,594,872	-		HGI48_RS11870	0.51	-1.4