Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS11860

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,590,075	-		HGI48_RS11855	0.38	+0.5
2,590,092	+		HGI48_RS11855	0.39	-1.2
2,590,092	+		HGI48_RS11855	0.39	+0.2
2,590,093	-		HGI48_RS11855	0.39	-0.5
2,590,093	-		HGI48_RS11855	0.39	+0.5
2,590,093	-		HGI48_RS11855	0.39	+0.2
2,590,093	-		HGI48_RS11855	0.39	+0.2
2,590,328	-		HGI48_RS11855	0.55	-0.5
2,590,328	-		HGI48_RS11855	0.55	-0.2
2,590,418	-		HGI48_RS11855	0.62	+0.5
2,590,979	-				+1.1
2,590,979	-				-0.5
2,590,982	+				-0.7
2,590,983	-				+0.2
2,591,063	+				-0.3
2,591,266	+		HGI48_RS11860	0.22	+0.2
2,591,369	+		HGI48_RS11860	0.30	-1.1
2,591,369	+		HGI48_RS11860	0.30	-0.4
2,591,369	+				-0.1
2,591,370	-		HGI48_RS11860	0.30	-0.7
2,591,370	-		HGI48_RS11860	0.30	+0.5
2,591,493	-		HGI48_RS11860	0.39	-0.1
2,591,493	-		HGI48_RS11860	0.39	-0.9
2,591,495	+		HGI48_RS11860	0.40	-0.4
2,591,495	+		HGI48_RS11860	0.40	+0.1
2,591,496	-		HGI48_RS11860	0.40	-0.5
2,591,496	-		HGI48_RS11860	0.40	+0.2
2,591,496	-				+0.9
2,591,619	+		HGI48_RS11860	0.49	+0.3
2,591,620	-		HGI48_RS11860	0.50	+1.3
2,591,620	-		HGI48_RS11860	0.50	-0.5
2,592,005	+		HGI48_RS11860	0.80	-0.2
2,592,005	+		HGI48_RS11860	0.80	-0.4
2,592,005	+				+0.9
2,592,006	-		HGI48_RS11860	0.80	+0.2
2,592,006	-		HGI48_RS11860	0.80	-0.3
2,592,006	-		HGI48_RS11860	0.80	-0.7
2,592,132	+				+0.9
2,592,133	-				-0.1
2,592,134	+				-0.0
2,592,134	+				+0.5
2,592,134	+				+1.5
2,592,135	-				-0.0
2,592,135	-				+2.0
2,592,253	-				-0.6
2,592,324	+				-0.8
2,592,324	+				-0.4
2,592,325	-				-0.3
2,592,328	+				+0.1
2,592,329	-				-0.5
2,592,395	+				-0.2
2,592,396	-				+0.5
2,592,407	+				+1.7
2,592,461	-				+0.7
2,592,561	+		HGI48_RS11865	0.12	-0.3
2,592,561	+		HGI48_RS11865	0.12	-0.1
2,592,601	+		HGI48_RS11865	0.15	+0.0
2,592,602	-		HGI48_RS11865	0.15	-0.9
2,592,602	-		HGI48_RS11865	0.15	-0.5
2,592,602	-		HGI48_RS11865	0.15	-0.4
2,592,602	-		HGI48_RS11865	0.15	-1.4
2,592,602	-		HGI48_RS11865	0.15	+0.5
2,592,604	-		HGI48_RS11865	0.15	-2.4
2,592,631	+		HGI48_RS11865	0.17	+0.3
2,592,631	+		HGI48_RS11865	0.17	-1.4
2,592,631	+		HGI48_RS11865	0.17	-0.6
2,592,631	+		HGI48_RS11865	0.17	+0.1
2,592,632	-		HGI48_RS11865	0.17	-2.1
2,592,632	-		HGI48_RS11865	0.17	+0.5
2,592,877	+		HGI48_RS11865	0.33	-0.8
2,592,877	+		HGI48_RS11865	0.33	-0.3
2,592,878	-				-0.1
2,592,925	+		HGI48_RS11865	0.36	-1.7
2,593,060	+		HGI48_RS11865	0.45	-0.8