Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS11125

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,421,161	+		HGI48_RS11120	0.90	-1.3
2,421,291	+				-0.8
2,421,291	+				+0.1
2,421,292	-				-0.3
2,421,292	-				+0.6
2,421,292	-				-2.4
2,421,332	+				-0.2
2,421,332	+				+0.4
2,421,333	-				+1.2
2,421,400	+				+1.0
2,421,400	+				-0.6
2,421,400	+				-0.8
2,421,400	+				-1.9
2,421,401	-				-1.8
2,421,416	-				-0.4
2,421,416	-				-1.4
2,421,416	-				-0.8
2,421,418	+				-2.5
2,421,418	+				+0.5
2,421,418	+				-1.0
2,421,418	+				-0.8
2,421,419	-				+0.7
2,421,419	-				-1.2
2,421,419	-				+0.3
2,421,419	-				+0.4
2,421,419	-				-1.9
2,421,419	-				-2.1
2,421,481	+				-0.7
2,421,523	+				-0.6
2,421,524	-				-1.6
2,421,544	+				+0.4
2,421,544	+				+1.4
2,421,545	-				-0.2
2,421,545	-				+0.4
2,421,549	+				+0.4
2,421,549	+				+2.2
2,421,616	+		HGI48_RS11125	0.12	-1.2
2,421,616	+		HGI48_RS11125	0.12	-0.4
2,421,617	-		HGI48_RS11125	0.12	+0.4
2,421,801	+		HGI48_RS11125	0.22	-0.6
2,421,801	+		HGI48_RS11125	0.22	-0.6
2,421,801	+		HGI48_RS11125	0.22	-0.0
2,421,802	-		HGI48_RS11125	0.22	+0.7
2,421,802	-		HGI48_RS11125	0.22	-0.6
2,421,802	-		HGI48_RS11125	0.22	+0.3
2,421,802	-		HGI48_RS11125	0.22	+0.2
2,421,802	-		HGI48_RS11125	0.22	+0.5
2,421,802	-		HGI48_RS11125	0.22	-2.6
2,421,901	+		HGI48_RS11125	0.28	-0.1
2,421,901	+		HGI48_RS11125	0.28	-1.6
2,422,040	-		HGI48_RS11125	0.35	-1.9
2,422,040	-		HGI48_RS11125	0.35	+0.6
2,422,040	-				+1.2
2,422,040	-		HGI48_RS11125	0.35	+0.1
2,422,171	+		HGI48_RS11125	0.42	-1.6
2,422,171	+		HGI48_RS11125	0.42	-0.6
2,422,171	+		HGI48_RS11125	0.42	-0.6
2,422,172	-		HGI48_RS11125	0.42	-1.1
2,422,172	-		HGI48_RS11125	0.42	+1.0
2,422,172	-		HGI48_RS11125	0.42	-0.4
2,422,240	-		HGI48_RS11125	0.46	+1.4
2,422,642	-		HGI48_RS11125	0.68	+0.0
2,422,642	-		HGI48_RS11125	0.68	-0.6
2,422,854	+		HGI48_RS11125	0.80	-0.9
2,422,854	+		HGI48_RS11125	0.80	+0.1
2,422,854	+		HGI48_RS11125	0.80	-1.0
2,422,854	+		HGI48_RS11125	0.80	-1.2
2,422,855	-				+0.4
2,422,855	-				-1.2
2,422,855	-		HGI48_RS11125	0.80	-0.9
2,422,855	-		HGI48_RS11125	0.80	+0.7
2,422,855	-				+1.2
2,422,855	-		HGI48_RS11125	0.80	-0.3
2,422,855	-		HGI48_RS11125	0.80	-0.4
2,422,855	-		HGI48_RS11125	0.80	-0.9
2,422,985	-		HGI48_RS11125	0.87	-0.3
2,423,098	+				+0.9
2,423,098	+				+0.2
2,423,098	+				-1.7
2,423,099	-				-0.4
2,423,146	+				+0.4
2,423,180	+				-0.2
2,423,180	+				-1.5
2,423,181	-				+0.6
2,423,192	-				-1.8
2,423,192	-				-0.6
2,423,211	+				+0.8
2,423,211	+				-1.4
2,423,211	+				-0.6
2,423,211	+				-0.0
2,423,211	+				+0.1
2,423,211	+				-0.1
2,423,212	-				+0.4
2,423,212	-				-1.4
2,423,212	-				+0.7
2,423,212	-				+0.4
2,423,212	-				-0.3
2,423,212	-				-1.9
2,423,216	+				+0.0
2,423,292	+		HGI48_RS11130	0.18	-0.2
2,423,293	-		HGI48_RS11130	0.18	+1.0
2,423,298	-		HGI48_RS11130	0.20	-2.3
2,423,562	+				+0.2
2,423,563	-				-2.2
2,423,563	-				-0.4
2,423,563	-				-0.2
2,423,563	-				-2.6
2,423,615	+				-0.6
2,423,617	+				+0.4
2,423,687	-				-0.1
2,423,707	-				-1.1
2,423,723	+				-1.6
2,423,726	+				+0.8
2,423,726	+				-0.9
2,423,761	+				+0.4
2,423,926	+		HGI48_RS11135	0.17	+0.0
2,423,926	+		HGI48_RS11135	0.17	+0.2
2,423,926	+		HGI48_RS11135	0.17	-0.1
2,423,926	+		HGI48_RS11135	0.17	+0.4
2,423,926	+		HGI48_RS11135	0.17	-0.6
2,423,927	-		HGI48_RS11135	0.17	-1.2
2,423,927	-				+1.8
2,423,927	-				+1.6
2,424,041	-		HGI48_RS11135	0.34	-2.8