Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10975

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,379,192	+		HGI48_RS10965	0.87	+0.2
2,379,193	-		HGI48_RS10965	0.87	+0.7
2,379,193	-		HGI48_RS10965	0.87	-0.6
2,379,218	+				-0.2
2,379,258	-				-0.1
2,379,298	+				-1.6
2,379,299	-				-0.3
2,379,299	-				+0.4
2,379,300	+				+1.8
2,379,301	-				-0.1
2,379,385	+				-0.0
2,380,058	-				+1.1
2,380,094	-				-0.3
2,380,094	-				-0.8
2,380,094	-				+0.4
2,380,100	-				-0.6
2,380,101	+				-2.2
2,380,101	+				+0.1
2,380,101	+				-0.5
2,380,101	+				-2.3
2,380,102	-				-0.9
2,380,102	-				-0.2
2,380,175	-				+0.0
2,380,184	+				-0.9
2,380,230	+				-1.5
2,380,231	-				+0.0
2,380,231	-				-2.0
2,380,296	+				+2.6
2,380,497	-		HGI48_RS10975	0.28	-0.8
2,380,566	+		HGI48_RS10975	0.35	-1.9
2,380,653	+		HGI48_RS10975	0.42	+0.3
2,380,653	+		HGI48_RS10975	0.42	-2.6
2,380,786	-		HGI48_RS10975	0.55	-1.6
2,380,798	+		HGI48_RS10975	0.56	+0.0
2,380,798	+				-1.2
2,380,798	+		HGI48_RS10975	0.56	-0.8
2,380,799	-		HGI48_RS10975	0.56	-0.3
2,380,799	-		HGI48_RS10975	0.56	-0.2
2,380,799	-		HGI48_RS10975	0.56	+0.7
2,380,799	-		HGI48_RS10975	0.56	-1.2
2,380,841	-		HGI48_RS10975	0.60	-0.4
2,381,176	+				+0.7
2,381,176	+				+2.0
2,381,176	+				+0.4
2,381,234	-				-1.4
2,381,234	-				-0.9
2,381,337	-				-0.1
2,381,419	+				+1.0
2,381,420	-				-0.9
2,381,470	+				-0.7
2,381,472	+				-1.2
2,381,472	+				-0.2
2,381,473	-				+0.1
2,381,473	-				+0.0
2,381,479	+				-0.6
2,381,479	+				+0.4
2,381,506	+				+0.1
2,381,594	-				-0.5
2,381,728	+				-1.2
2,381,728	+		HGI48_RS10980	0.20	-1.2
2,381,728	+		HGI48_RS10980	0.20	+0.1
2,381,751	+		HGI48_RS10980	0.22	-0.3
2,381,751	+		HGI48_RS10980	0.22	-0.1
2,381,752	-		HGI48_RS10980	0.22	-0.3
2,381,752	-		HGI48_RS10980	0.22	-0.1
2,381,755	+				+2.2
2,381,755	+		HGI48_RS10980	0.22	-1.6
2,381,755	+		HGI48_RS10980	0.22	-0.2
2,381,755	+		HGI48_RS10980	0.22	+1.0
2,381,756	-		HGI48_RS10980	0.22	-0.1
2,381,756	-		HGI48_RS10980	0.22	-1.9
2,381,782	+		HGI48_RS10980	0.24	+0.3
2,381,782	+		HGI48_RS10980	0.24	+0.7
2,381,783	-		HGI48_RS10980	0.24	-0.1
2,381,783	-		HGI48_RS10980	0.24	-1.0
2,381,860	+		HGI48_RS10980	0.31	+0.2
2,381,860	+		HGI48_RS10980	0.31	+0.1
2,381,861	-		HGI48_RS10980	0.31	+0.1
2,381,861	-				+1.0
2,381,932	+		HGI48_RS10980	0.37	-0.5
2,382,064	+		HGI48_RS10980	0.48	+1.1
2,382,064	+		HGI48_RS10980	0.48	+0.4
2,382,065	-		HGI48_RS10980	0.48	-1.4
2,382,082	+		HGI48_RS10980	0.50	-0.6
2,382,083	-		HGI48_RS10980	0.50	+0.2
2,382,130	-		HGI48_RS10980	0.54	-0.2
2,382,132	+		HGI48_RS10980	0.54	+0.5
2,382,169	+				-1.2
2,382,173	+		HGI48_RS10980	0.57	+0.6
2,382,173	+		HGI48_RS10980	0.57	+0.0
2,382,174	-		HGI48_RS10980	0.57	+0.5
2,382,174	-		HGI48_RS10980	0.57	-0.3