Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10830

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,346,787	+				+0.4
2,346,788	-				-0.4
2,346,788	-				+0.8
2,346,825	+				+0.2
2,346,826	-				+0.0
2,346,860	-				+0.4
2,346,878	+				+1.0
2,346,878	+				+0.8
2,346,879	-				+0.4
2,346,963	-				-0.6
2,347,007	+				-0.2
2,347,014	+				-0.9
2,347,014	+				+0.4
2,347,014	+				-1.0
2,347,014	+				-0.7
2,347,015	-		HGI48_RS10825	0.10	-0.5
2,347,015	-		HGI48_RS10825	0.10	+1.2
2,347,015	-		HGI48_RS10825	0.10	-0.6
2,347,015	-		HGI48_RS10825	0.10	-0.4
2,347,019	-		HGI48_RS10825	0.11	-0.3
2,347,051	+		HGI48_RS10825	0.15	-0.8
2,347,057	+				+1.4
2,347,058	-		HGI48_RS10825	0.16	+0.1
2,347,192	-		HGI48_RS10825	0.33	-0.2
2,347,231	+		HGI48_RS10825	0.38	-1.2
2,347,231	+		HGI48_RS10825	0.38	-1.1
2,347,232	-				-0.6
2,347,232	-		HGI48_RS10825	0.38	-3.3
2,347,232	-		HGI48_RS10825	0.38	-1.4
2,347,232	-		HGI48_RS10825	0.38	-0.3
2,347,389	+		HGI48_RS10825	0.59	-0.2
2,347,468	+		HGI48_RS10825	0.69	+0.9
2,347,468	+		HGI48_RS10825	0.69	-1.2
2,347,469	-		HGI48_RS10825	0.69	-0.6
2,347,505	-		HGI48_RS10825	0.74	+0.0
2,347,628	+				-0.1
2,347,629	-				+0.3
2,347,773	-				+1.7
2,348,510	+				+1.4
2,348,510	+				-1.2
2,348,510	+				-0.9
2,348,510	+				-1.2
2,348,511	-				-1.0
2,348,511	-				+0.8
2,348,557	-				+0.2
2,348,567	-				+1.4
2,348,637	+				-1.2
2,348,637	+				-0.6
2,348,637	+				-0.5
2,348,637	+				-0.2
2,348,638	-				+0.3
2,348,638	-				-1.6
2,348,867	+		HGI48_RS10835	0.19	+0.1
2,348,915	+		HGI48_RS10835	0.23	-0.4
2,348,916	-		HGI48_RS10835	0.23	+0.4
2,348,932	+				-1.2
2,348,933	-		HGI48_RS10835	0.25	+0.0
2,349,008	+		HGI48_RS10835	0.31	+0.7
2,349,117	+		HGI48_RS10835	0.41	-2.6
2,349,118	-		HGI48_RS10835	0.41	-1.4
2,349,118	-		HGI48_RS10835	0.41	-0.3
2,349,219	-		HGI48_RS10835	0.50	-0.3
2,349,311	-				+2.4
2,349,372	+		HGI48_RS10835	0.63	-0.2
2,349,372	+				+2.2
2,349,373	-		HGI48_RS10835	0.63	-0.3
2,349,373	-		HGI48_RS10835	0.63	+1.1
2,349,373	-				-1.2
2,349,373	-		HGI48_RS10835	0.63	-0.7
2,349,373	-				+0.4