Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10575

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,280,203	+		HGI48_RS10565	0.81	+0.4
2,280,245	+				-0.1
2,280,245	+		HGI48_RS10565	0.84	-0.9
2,280,246	-		HGI48_RS10565	0.84	+0.4
2,280,246	-		HGI48_RS10565	0.84	+0.4
2,280,246	-		HGI48_RS10565	0.84	+1.7
2,280,625	+		HGI48_RS10570	0.17	+1.3
2,280,625	+		HGI48_RS10570	0.17	+0.4
2,280,625	+				+0.4
2,280,676	-		HGI48_RS10570	0.26	-0.9
2,280,697	-		HGI48_RS10570	0.29	+0.4
2,280,864	+		HGI48_RS10570	0.58	-1.6
2,280,865	-		HGI48_RS10570	0.58	-2.1
2,281,090	+				-1.1
2,281,091	-				-0.3
2,281,182	-		HGI48_RS10575	0.12	-1.6
2,281,288	+				-1.1
2,281,288	+				-0.1
2,281,288	+		HGI48_RS10575	0.30	+0.1
2,281,289	-		HGI48_RS10575	0.30	+1.1
2,281,368	-		HGI48_RS10575	0.44	-2.6
2,281,483	+		HGI48_RS10575	0.64	-1.9
2,281,510	+				-1.1
2,281,621	-		HGI48_RS10575	0.87	-1.7
2,281,642	-				+0.1
2,281,685	-				+0.0
2,281,685	-				-0.9
2,281,695	+				+0.4
2,281,704	+				+0.4
2,281,705	-				-2.4
2,281,705	-				-1.4
2,281,712	-				+1.1
2,281,712	-				-0.9
2,281,755	-				-0.0
2,281,755	-				-2.4
2,281,770	-				+0.4
2,281,798	-				-0.1
2,281,972	-				+0.2
2,282,039	+				-0.1
2,282,039	+				-0.8
2,282,041	+				+0.4
2,282,041	+				-2.9
2,282,041	+				-0.4
2,282,041	+				+0.6
2,282,042	-				-0.6
2,282,042	-				+0.0
2,282,042	-				+0.1
2,282,042	-				+0.4
2,282,051	+				-0.4
2,282,059	+				-1.1
2,282,059	+				-2.7
2,282,059	+				-1.1
2,282,059	+				+1.8
2,282,060	-				-0.6
2,282,060	-				+0.4
2,282,060	-				-0.9
2,282,069	+				-0.6
2,282,069	+				+0.7
2,282,069	+				-0.8
2,282,070	-				+0.3
2,282,075	+				+0.1
2,282,075	+				-0.2
2,282,076	-				-0.3
2,282,076	-				-1.3
2,282,076	-				-0.6
2,282,076	-				-0.1
2,282,076	-				-1.0
2,282,076	-				+1.3
2,282,076	-				+0.4
2,282,091	+				-0.1
2,282,091	+				-0.6
2,282,092	-				-0.3
2,282,110	+				+1.0
2,282,110	+				-1.6
2,282,111	-				-0.1
2,282,111	-				+0.1
2,282,234	+				-0.0
2,282,235	-				+1.4
2,282,393	-		HGI48_RS10580	0.19	+0.1
2,282,403	+		HGI48_RS10580	0.19	-0.8
2,282,403	+		HGI48_RS10580	0.19	-1.4
2,282,404	-		HGI48_RS10580	0.19	-0.3
2,282,404	-		HGI48_RS10580	0.19	+0.0
2,282,440	-		HGI48_RS10580	0.21	-1.1
2,282,447	+		HGI48_RS10580	0.22	-1.1
2,282,447	+		HGI48_RS10580	0.22	-3.4
2,282,448	-		HGI48_RS10580	0.22	-2.1
2,282,475	+		HGI48_RS10580	0.23	-1.4
2,282,477	+		HGI48_RS10580	0.23	-0.3
2,282,477	+		HGI48_RS10580	0.23	-0.1
2,282,477	+		HGI48_RS10580	0.23	+1.0
2,282,478	-		HGI48_RS10580	0.23	-2.6
2,282,478	-		HGI48_RS10580	0.23	-0.1
2,282,478	-		HGI48_RS10580	0.23	+0.0
2,282,478	-		HGI48_RS10580	0.23	-0.6
2,282,478	-		HGI48_RS10580	0.23	+0.4
2,282,481	+		HGI48_RS10580	0.24	-0.8
2,282,481	+		HGI48_RS10580	0.24	-0.9
2,282,481	+				+1.9
2,282,481	+		HGI48_RS10580	0.24	-0.6
2,282,481	+		HGI48_RS10580	0.24	-0.9
2,282,481	+				-1.1
2,282,481	+		HGI48_RS10580	0.24	+0.4
2,282,482	-		HGI48_RS10580	0.24	-0.3
2,282,482	-				-1.1
2,282,482	-		HGI48_RS10580	0.24	-0.6
2,282,482	-		HGI48_RS10580	0.24	-0.3
2,282,482	-		HGI48_RS10580	0.24	-0.1
2,282,482	-				-0.1
2,282,482	-		HGI48_RS10580	0.24	+0.1
2,282,482	-		HGI48_RS10580	0.24	+0.3
2,282,501	+		HGI48_RS10580	0.25	+0.4
2,282,502	-				+0.4
2,282,502	-		HGI48_RS10580	0.25	-0.2
2,282,502	-		HGI48_RS10580	0.25	-0.3
2,282,502	-		HGI48_RS10580	0.25	-0.1
2,282,516	+		HGI48_RS10580	0.26	-0.5
2,282,530	+		HGI48_RS10580	0.27	-0.1
2,282,539	+		HGI48_RS10580	0.27	+0.7
2,282,539	+		HGI48_RS10580	0.27	+1.4
2,282,539	+		HGI48_RS10580	0.27	+0.2
2,282,539	+		HGI48_RS10580	0.27	-2.1
2,282,539	+		HGI48_RS10580	0.27	-0.3
2,282,541	+				-0.1
2,282,570	+		HGI48_RS10580	0.29	+0.6
2,282,571	-		HGI48_RS10580	0.29	-2.4
2,282,582	+		HGI48_RS10580	0.30	+0.1
2,282,583	-		HGI48_RS10580	0.30	-2.6
2,282,608	-		HGI48_RS10580	0.31	+0.2
2,282,682	+		HGI48_RS10580	0.35	+1.4