Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10515

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,266,781	-		HGI48_RS10510	0.10	-1.7
2,266,785	-		HGI48_RS10510	0.11	+0.3
2,266,790	+		HGI48_RS10510	0.12	-0.8
2,266,824	+		HGI48_RS10510	0.16	-2.3
2,266,825	-				+0.9
2,267,077	-				+0.4
2,267,077	-		HGI48_RS10510	0.49	-1.6
2,267,177	-				+0.4
2,267,254	-		HGI48_RS10510	0.72	+0.2
2,267,271	-		HGI48_RS10510	0.75	+0.2
2,267,271	-		HGI48_RS10510	0.75	+0.0
2,267,271	-		HGI48_RS10510	0.75	-1.1
2,267,369	+		HGI48_RS10510	0.88	-0.1
2,267,370	-		HGI48_RS10510	0.88	-0.4
2,267,424	+				-1.6
2,267,457	-				-0.8
2,267,534	-				-0.6
2,267,547	+				-0.3
2,267,548	-				-0.6
2,267,617	+				+0.8
2,267,617	+				-1.9
2,267,617	+				-0.6
2,267,618	-				+1.0
2,267,618	-				-0.6
2,267,621	+				-1.9
2,267,621	+				-0.6
2,267,650	+				-0.0
2,267,650	+				-0.8
2,267,661	-				-0.5
2,267,715	+				-0.1
2,267,716	-				+1.1
2,267,717	+				-1.4
2,267,718	-				-1.1
2,267,718	-				+0.1
2,267,718	-				-0.2
2,267,740	+				+1.0
2,267,741	+				-2.6
2,267,754	-				+0.0
2,267,765	-				+1.4
2,267,836	-				+0.0
2,267,880	+		HGI48_RS10515	0.13	-0.9
2,267,881	-				+1.0
2,267,897	-		HGI48_RS10515	0.14	-0.1
2,268,052	+		HGI48_RS10515	0.29	-1.3
2,268,052	+		HGI48_RS10515	0.29	-1.6
2,268,052	+				+2.0
2,268,052	+				-1.1
2,268,053	-		HGI48_RS10515	0.29	-0.2
2,268,053	-		HGI48_RS10515	0.29	-0.4
2,268,053	-		HGI48_RS10515	0.29	+0.2
2,268,053	-		HGI48_RS10515	0.29	+0.1
2,268,053	-		HGI48_RS10515	0.29	-1.3
2,268,053	-		HGI48_RS10515	0.29	-1.6
2,268,283	+		HGI48_RS10515	0.51	-0.7
2,268,284	-		HGI48_RS10515	0.51	+1.0
2,268,285	+		HGI48_RS10515	0.51	-0.7
2,268,285	+		HGI48_RS10515	0.51	-1.9
2,268,285	+				-0.1
2,268,286	-		HGI48_RS10515	0.52	+0.1
2,268,286	-		HGI48_RS10515	0.52	+0.9
2,268,286	-		HGI48_RS10515	0.52	-0.0
2,268,396	+		HGI48_RS10515	0.62	-1.7
2,268,415	-		HGI48_RS10515	0.64	+0.7
2,268,415	-				-0.6
2,268,415	-		HGI48_RS10515	0.64	+0.1
2,268,427	+				-1.1
2,268,687	+		HGI48_RS10515	0.90	+0.3
2,268,687	+				-0.1
2,268,790	+				-2.1
2,268,790	+				-0.3
2,268,790	+				+0.6
2,268,791	-				+0.2
2,268,795	+				-0.3
2,268,796	-				-1.3
2,268,796	-				-0.1
2,268,800	+				+0.4
2,269,113	+				-0.7
2,269,175	+				-0.2
2,269,175	+				-0.3
2,269,175	+				-1.7
2,269,175	+				-0.6
2,269,175	+				-0.0
2,269,176	-				+0.4
2,269,176	-				-0.6
2,269,222	+				-1.7
2,269,234	+				-0.3
2,269,235	-				-0.2
2,269,235	-				+0.9
2,269,235	-				+1.0
2,269,235	-				+0.4
2,269,360	-		HGI48_RS10520	0.23	-2.8
2,269,428	+		HGI48_RS10520	0.37	-2.4
2,269,428	+		HGI48_RS10520	0.37	-1.1
2,269,429	-		HGI48_RS10520	0.37	-0.1
2,269,580	-		HGI48_RS10520	0.68	+0.0
2,269,580	-		HGI48_RS10520	0.68	-0.9
2,269,608	+		HGI48_RS10520	0.74	-0.1
2,269,608	+		HGI48_RS10520	0.74	+0.4
2,269,678	-		HGI48_RS10520	0.88	-0.1
2,269,691	+				+1.3