Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10500

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,264,239	+				+0.4
2,264,239	+				-0.6
2,264,295	-				+0.4
2,264,318	+				-0.7
2,264,318	+				-0.9
2,264,318	+				-0.0
2,264,319	-				+0.1
2,264,337	+				+0.4
2,264,337	+				+0.6
2,264,338	-				+0.4
2,264,339	+				+0.2
2,264,339	+				+0.1
2,264,340	-				-0.1
2,264,340	-				-0.1
2,264,460	-				-0.1
2,264,553	+		HGI48_RS10495	0.37	-0.3
2,264,554	-				+2.0
2,264,554	-		HGI48_RS10495	0.37	-0.5
2,264,554	-		HGI48_RS10495	0.37	+0.0
2,264,554	-		HGI48_RS10495	0.37	-0.9
2,264,554	-		HGI48_RS10495	0.37	+0.8
2,264,559	+		HGI48_RS10495	0.38	-0.6
2,264,559	+		HGI48_RS10495	0.38	-0.1
2,264,559	+				+1.8
2,264,559	+		HGI48_RS10495	0.38	-0.4
2,264,559	+		HGI48_RS10495	0.38	+1.6
2,264,560	-		HGI48_RS10495	0.38	-0.5
2,264,560	-				+1.2
2,264,560	-		HGI48_RS10495	0.38	+0.6
2,264,560	-		HGI48_RS10495	0.38	+0.0
2,264,560	-		HGI48_RS10495	0.38	-1.7
2,264,560	-		HGI48_RS10495	0.38	-0.9
2,264,560	-		HGI48_RS10495	0.38	-1.1
2,264,560	-		HGI48_RS10495	0.38	-0.6
2,264,594	+		HGI48_RS10495	0.44	-0.0
2,264,595	-		HGI48_RS10495	0.44	+0.4
2,264,595	-		HGI48_RS10495	0.44	+1.2
2,264,595	-		HGI48_RS10495	0.44	+0.4
2,264,595	-		HGI48_RS10495	0.44	+2.2
2,264,610	+		HGI48_RS10495	0.46	-1.6
2,264,619	-		HGI48_RS10495	0.48	+0.6
2,264,619	-		HGI48_RS10495	0.48	+0.4
2,264,624	+		HGI48_RS10495	0.49	-0.0
2,264,625	-		HGI48_RS10495	0.49	+0.1
2,264,625	-		HGI48_RS10495	0.49	+0.4
2,264,625	-		HGI48_RS10495	0.49	+0.8
2,264,741	-		HGI48_RS10495	0.67	-0.1
2,264,977	+				+2.2
2,265,002	+				+0.8
2,265,003	-				+1.4
2,265,003	-				+0.4
2,265,003	-				-2.1
2,265,012	-				-0.2
2,265,023	+				+1.0
2,265,023	+				-0.7
2,265,198	+				-1.0
2,265,198	+				-2.9
2,265,199	-				-1.1
2,265,346	+		HGI48_RS10500	0.24	-1.1
2,265,346	+		HGI48_RS10500	0.24	-2.1
2,265,346	+		HGI48_RS10500	0.24	-0.6
2,265,347	-		HGI48_RS10500	0.24	-0.7
2,265,347	-		HGI48_RS10500	0.24	-2.1
2,265,347	-		HGI48_RS10500	0.24	-0.4
2,265,347	-		HGI48_RS10500	0.24	-2.5
2,265,347	-		HGI48_RS10500	0.24	-0.3
2,265,350	-		HGI48_RS10500	0.24	-0.3
2,265,433	+		HGI48_RS10500	0.34	-1.0
2,265,469	-		HGI48_RS10500	0.38	-0.4
2,265,490	-		HGI48_RS10500	0.40	+0.4
2,265,490	-		HGI48_RS10500	0.40	-1.5
2,265,550	+		HGI48_RS10500	0.47	-1.6
2,265,682	+		HGI48_RS10500	0.62	-1.1
2,265,682	+		HGI48_RS10500	0.62	-1.9
2,265,683	-		HGI48_RS10500	0.62	-2.1
2,265,683	-		HGI48_RS10500	0.62	-0.9
2,265,847	+		HGI48_RS10500	0.80	-2.4
2,265,975	+				-2.6
2,266,024	+				+0.4
2,266,032	+				-1.1
2,266,032	+				+0.4
2,266,033	-				-1.1
2,266,045	-				-0.2
2,266,271	+		HGI48_RS10505	0.31	-0.6
2,266,271	+		HGI48_RS10505	0.31	-0.2
2,266,271	+		HGI48_RS10505	0.31	-0.3
2,266,271	+		HGI48_RS10505	0.31	+0.2
2,266,272	-				+1.2
2,266,272	-				+0.4
2,266,278	-		HGI48_RS10505	0.32	-0.2
2,266,289	+		HGI48_RS10505	0.34	+0.4
2,266,289	+		HGI48_RS10505	0.34	+1.0
2,266,290	-		HGI48_RS10505	0.34	-1.0
2,266,290	-		HGI48_RS10505	0.34	+0.6
2,266,290	-		HGI48_RS10505	0.34	-0.2
2,266,407	+		HGI48_RS10505	0.54	-2.1
2,266,585	+		HGI48_RS10505	0.84	+0.6
2,266,781	-		HGI48_RS10510	0.10	-1.7
2,266,785	-		HGI48_RS10510	0.11	+0.3
2,266,790	+		HGI48_RS10510	0.12	-0.8
2,266,824	+		HGI48_RS10510	0.16	-2.3
2,266,825	-				+0.9