Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS09270

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,988,463	-				+1.2
1,988,463	-				+2.1
1,988,463	-				-0.6
1,988,465	+				-0.5
1,988,471	-				+0.8
1,988,691	+		HGI48_RS09265	0.29	-1.1
1,988,691	+		HGI48_RS09265	0.29	+0.2
1,988,692	-		HGI48_RS09265	0.29	-0.6
1,988,908	-		HGI48_RS09265	0.52	-1.1
1,989,168	-		HGI48_RS09265	0.80	+0.5
1,989,202	+		HGI48_RS09265	0.84	-0.3
1,989,202	+		HGI48_RS09265	0.84	+0.2
1,989,203	-		HGI48_RS09265	0.84	-0.8
1,989,209	+		HGI48_RS09265	0.84	-0.2
1,989,288	-				-0.1
1,989,288	-				-1.1
1,989,348	+				+2.1
1,989,348	+				+0.5
1,989,348	+				-2.5
1,989,365	+				-2.6
1,989,388	-				-0.1
1,989,394	+				+0.8
1,989,395	-				-1.1
1,989,466	+				+1.1
1,989,466	+				+1.1
1,989,466	+				-2.1
1,989,467	-				-1.2
1,989,905	+		HGI48_RS09270	0.32	-0.8
1,989,905	+				-1.1
1,989,906	-		HGI48_RS09270	0.32	-0.1
1,990,077	-				-0.1
1,990,232	+		HGI48_RS09270	0.51	-2.5
1,990,232	+		HGI48_RS09270	0.51	-0.5
1,990,232	+		HGI48_RS09270	0.51	-0.6
1,990,232	+		HGI48_RS09270	0.51	-2.3
1,990,232	+		HGI48_RS09270	0.51	-0.3
1,990,233	-		HGI48_RS09270	0.51	+0.1
1,990,233	-		HGI48_RS09270	0.51	+0.5
1,990,235	-		HGI48_RS09270	0.51	+0.2
1,990,235	-		HGI48_RS09270	0.51	+0.1
1,990,424	-		HGI48_RS09270	0.62	-0.5
1,990,424	-		HGI48_RS09270	0.62	-0.2
1,990,424	-		HGI48_RS09270	0.62	-1.3
1,990,466	+		HGI48_RS09270	0.65	-0.5
1,990,466	+		HGI48_RS09270	0.65	-1.5
1,990,466	+		HGI48_RS09270	0.65	-0.1
1,990,467	-		HGI48_RS09270	0.65	-0.8
1,990,467	-		HGI48_RS09270	0.65	+0.1
1,990,467	-		HGI48_RS09270	0.65	+0.3
1,990,467	-		HGI48_RS09270	0.65	+0.4
1,990,511	-		HGI48_RS09270	0.68	-1.8
1,990,525	+		HGI48_RS09270	0.68	+0.9
1,990,526	-		HGI48_RS09270	0.69	+1.0
1,990,603	+		HGI48_RS09270	0.73	-0.7
1,990,603	+		HGI48_RS09270	0.73	+0.3
1,990,604	-		HGI48_RS09270	0.73	+1.1
1,990,613	+		HGI48_RS09270	0.74	+0.7
1,990,627	+		HGI48_RS09270	0.74	-1.1
1,990,627	+		HGI48_RS09270	0.74	-1.1
1,990,649	+		HGI48_RS09270	0.76	-0.6
1,990,649	+		HGI48_RS09270	0.76	-0.6
1,990,649	+				-0.5
1,990,650	-		HGI48_RS09270	0.76	-0.1
1,990,650	-		HGI48_RS09270	0.76	+0.3
1,990,650	-		HGI48_RS09270	0.76	-0.5
1,990,650	-		HGI48_RS09270	0.76	-1.3
1,990,650	-		HGI48_RS09270	0.76	+0.2
1,990,650	-		HGI48_RS09270	0.76	-0.4
1,990,717	+				-0.1
1,990,718	-		HGI48_RS09270	0.80	-0.7
1,990,718	-		HGI48_RS09270	0.80	-2.1
1,990,849	+		HGI48_RS09270	0.88	-0.2
1,990,850	-				+1.1
1,990,967	+				-1.1
1,990,967	+				-0.5
1,991,012	+				+0.5
1,991,012	+				+0.2
1,991,013	-				+0.8
1,991,048	-				+0.5
1,991,126	+				-0.8
1,991,259	+		HGI48_RS09275	0.15	+0.5
1,991,259	+		HGI48_RS09275	0.15	-0.2
1,991,259	+		HGI48_RS09275	0.15	+1.1
1,991,259	+		HGI48_RS09275	0.15	+0.2
1,991,262	+		HGI48_RS09275	0.16	-1.1
1,991,262	+		HGI48_RS09275	0.16	-0.1
1,991,262	+		HGI48_RS09275	0.16	+1.6
1,991,262	+		HGI48_RS09275	0.16	-0.7
1,991,263	-		HGI48_RS09275	0.16	+0.7
1,991,263	-		HGI48_RS09275	0.16	-0.1
1,991,263	-		HGI48_RS09275	0.16	-1.1
1,991,263	-		HGI48_RS09275	0.16	-0.2
1,991,263	-		HGI48_RS09275	0.16	-0.1
1,991,264	+				+0.9
1,991,264	+		HGI48_RS09275	0.16	+0.3
1,991,264	+		HGI48_RS09275	0.16	-2.1
1,991,264	+		HGI48_RS09275	0.16	-1.3
1,991,264	+		HGI48_RS09275	0.16	+0.5
1,991,265	-				+0.9
1,991,265	-		HGI48_RS09275	0.16	-0.8
1,991,265	-		HGI48_RS09275	0.16	-1.5
1,991,265	-		HGI48_RS09275	0.16	-0.1
1,991,265	-		HGI48_RS09275	0.16	-1.6
1,991,265	-		HGI48_RS09275	0.16	-0.9
1,991,265	-		HGI48_RS09275	0.16	+0.0
1,991,265	-		HGI48_RS09275	0.16	-0.6
1,991,265	-		HGI48_RS09275	0.16	-0.6
1,991,265	-		HGI48_RS09275	0.16	-0.5
1,991,613	+		HGI48_RS09275	0.56	+0.5
1,991,613	+		HGI48_RS09275	0.56	+0.1
1,991,613	+		HGI48_RS09275	0.56	+0.0
1,991,786	+		HGI48_RS09275	0.75	+0.5
1,991,786	+		HGI48_RS09275	0.75	+0.2
1,991,786	+		HGI48_RS09275	0.75	-0.5
1,991,787	-		HGI48_RS09275	0.76	+0.8
1,991,787	-		HGI48_RS09275	0.76	-2.1
1,991,787	-		HGI48_RS09275	0.76	+0.5
1,991,825	+		HGI48_RS09275	0.80	+0.1
1,991,825	+		HGI48_RS09275	0.80	+0.8
1,991,825	+				+1.3
1,991,993	+				-0.4
1,991,993	+				-0.0
1,991,993	+				-0.1
1,991,993	+				+0.3
1,991,993	+				-1.8
1,991,993	+				-0.3
1,991,993	+				+0.9
1,991,993	+				-1.8
1,991,994	-				-0.1
1,991,994	-				+0.8
1,991,994	-				-0.2
1,992,015	+				+1.5
1,992,016	-				-0.8
1,992,028	+				-0.7
1,992,029	-				-0.5
1,992,054	+				-0.9
1,992,054	+				-2.5