Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS09265

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,987,432	+		HGI48_RS09260	0.13	-0.8
1,987,433	-				-1.1
1,987,433	-		HGI48_RS09260	0.13	-1.0
1,987,436	+		HGI48_RS09260	0.14	-0.7
1,987,437	-		HGI48_RS09260	0.14	-0.5
1,987,437	-		HGI48_RS09260	0.14	-0.2
1,987,437	-		HGI48_RS09260	0.14	+1.1
1,987,450	+		HGI48_RS09260	0.15	+0.7
1,987,450	+		HGI48_RS09260	0.15	-1.9
1,987,451	-				-0.1
1,987,456	+				-1.1
1,987,457	-		HGI48_RS09260	0.16	-0.9
1,987,457	-		HGI48_RS09260	0.16	-0.5
1,987,457	-		HGI48_RS09260	0.16	+0.3
1,987,560	-		HGI48_RS09260	0.25	-0.3
1,987,560	-		HGI48_RS09260	0.25	-0.2
1,987,560	-		HGI48_RS09260	0.25	-2.7
1,987,733	-				-0.1
1,987,733	-				-0.1
1,988,011	-		HGI48_RS09260	0.64	-1.1
1,988,011	-		HGI48_RS09260	0.64	-2.8
1,988,463	-				+1.2
1,988,463	-				+2.1
1,988,463	-				-0.6
1,988,465	+				-0.5
1,988,471	-				+0.8
1,988,691	+		HGI48_RS09265	0.29	-1.1
1,988,691	+		HGI48_RS09265	0.29	+0.2
1,988,692	-		HGI48_RS09265	0.29	-0.6
1,988,908	-		HGI48_RS09265	0.52	-1.1
1,989,168	-		HGI48_RS09265	0.80	+0.5
1,989,202	+		HGI48_RS09265	0.84	-0.3
1,989,202	+		HGI48_RS09265	0.84	+0.2
1,989,203	-		HGI48_RS09265	0.84	-0.8
1,989,209	+		HGI48_RS09265	0.84	-0.2
1,989,288	-				-0.1
1,989,288	-				-1.1
1,989,348	+				+2.1
1,989,348	+				+0.5
1,989,348	+				-2.5
1,989,365	+				-2.6
1,989,388	-				-0.1
1,989,394	+				+0.8
1,989,395	-				-1.1
1,989,466	+				+1.1
1,989,466	+				+1.1
1,989,466	+				-2.1
1,989,467	-				-1.2
1,989,905	+		HGI48_RS09270	0.32	-0.8
1,989,905	+				-1.1
1,989,906	-		HGI48_RS09270	0.32	-0.1
1,990,077	-				-0.1
1,990,232	+		HGI48_RS09270	0.51	-2.5
1,990,232	+		HGI48_RS09270	0.51	-0.5
1,990,232	+		HGI48_RS09270	0.51	-0.6
1,990,232	+		HGI48_RS09270	0.51	-2.3
1,990,232	+		HGI48_RS09270	0.51	-0.3
1,990,233	-		HGI48_RS09270	0.51	+0.1
1,990,233	-		HGI48_RS09270	0.51	+0.5
1,990,235	-		HGI48_RS09270	0.51	+0.2
1,990,235	-		HGI48_RS09270	0.51	+0.1