Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS09195

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,972,601	-		HGI48_RS09190	0.45	+1.7
1,972,823	+		HGI48_RS09190	0.57	+0.2
1,972,823	+		HGI48_RS09190	0.57	-0.5
1,972,823	+		HGI48_RS09190	0.57	+0.7
1,972,955	+		HGI48_RS09190	0.65	-0.2
1,972,955	+				-0.5
1,973,015	+		HGI48_RS09190	0.68	-2.7
1,973,016	-				-1.0
1,973,016	-		HGI48_RS09190	0.68	-0.1
1,973,034	-		HGI48_RS09190	0.69	-0.5
1,973,034	-		HGI48_RS09190	0.69	+0.3
1,973,076	+		HGI48_RS09190	0.72	-0.6
1,973,085	-		HGI48_RS09190	0.72	-0.2
1,973,091	-		HGI48_RS09190	0.72	-0.7
1,973,097	-		HGI48_RS09190	0.73	-0.5
1,973,097	-		HGI48_RS09190	0.73	-0.3
1,973,097	-				+1.5
1,973,192	+		HGI48_RS09190	0.78	+0.5
1,973,376	-				+1.5
1,973,419	+				+0.5
1,973,526	-				-0.1
1,973,526	-				+0.2
1,973,526	-				+0.8
1,973,571	+				+0.0
1,973,571	+				-1.5
1,973,571	+				-2.0
1,973,571	+				-1.0
1,973,572	-				+0.9
1,973,572	-				+0.9
1,973,572	-				+0.5
1,973,786	+		HGI48_RS09195	0.86	-1.5
1,973,786	+		HGI48_RS09195	0.86	+0.1
1,973,786	+		HGI48_RS09195	0.86	-0.9
1,973,787	-				-1.0
1,973,787	-		HGI48_RS09195	0.86	+1.1
1,973,787	-		HGI48_RS09195	0.86	+0.1
1,973,787	-		HGI48_RS09195	0.86	-0.8
1,973,790	+		HGI48_RS09195	0.88	-0.2
1,973,790	+		HGI48_RS09195	0.88	-0.4
1,973,791	-		HGI48_RS09195	0.88	-0.5
1,973,791	-		HGI48_RS09195	0.88	+0.5
1,973,791	-		HGI48_RS09195	0.88	-1.2
1,973,791	-		HGI48_RS09195	0.88	-1.5
1,973,791	-		HGI48_RS09195	0.88	+0.3
1,973,791	-		HGI48_RS09195	0.88	-1.0
1,973,791	-				+1.9
1,973,793	+		HGI48_RS09195	0.89	-0.4
1,973,793	+		HGI48_RS09195	0.89	-0.5
1,973,794	-		HGI48_RS09195	0.89	+0.3
1,973,794	-		HGI48_RS09195	0.89	-0.7
1,973,819	+				+1.5
1,973,819	+				-0.5
1,973,819	+				-0.3
1,973,820	-				-1.0
1,973,820	-				-0.0
1,973,820	-				-0.3
1,973,820	-				-2.9
1,973,820	-				-0.6
1,973,820	-				+2.2
1,973,823	-				-0.0
1,973,823	-				-0.0
1,973,834	+				+0.4
1,973,834	+				-1.1
1,973,839	-				-0.4
1,973,879	+				-1.8
1,973,881	+				-0.5
1,973,881	+				+0.5
1,973,881	+				-0.0
1,973,881	+				-0.5
1,973,882	-				+0.1
1,973,993	+				+0.5
1,973,993	+				+0.4
1,974,079	+				-0.3
1,974,079	+				+0.1
1,974,079	+				+0.9
1,974,080	-				+0.1
1,974,080	-				-0.4
1,974,086	+				+0.5
1,974,086	+				-0.0
1,974,087	-				+0.3
1,974,087	-				+0.1
1,974,087	-				+1.0
1,974,147	+				+0.5
1,974,278	+		HGI48_RS09200	0.26	-1.8
1,974,278	+		HGI48_RS09200	0.26	+0.1
1,974,305	+		HGI48_RS09200	0.30	-1.3
1,974,305	+		HGI48_RS09200	0.30	+0.1
1,974,306	-				-1.0
1,974,306	-		HGI48_RS09200	0.30	-1.2
1,974,306	-		HGI48_RS09200	0.30	-0.1
1,974,306	-		HGI48_RS09200	0.30	-0.9
1,974,348	-		HGI48_RS09200	0.36	+0.5
1,974,457	+		HGI48_RS09200	0.52	-0.5
1,974,457	+				+0.5
1,974,458	-		HGI48_RS09200	0.52	-0.6
1,974,556	-		HGI48_RS09200	0.66	+0.1
1,974,651	+		HGI48_RS09200	0.80	+0.1
1,974,652	-		HGI48_RS09200	0.80	+0.2
1,974,718	+		HGI48_RS09200	0.89	-0.4
1,974,791	+				-0.5
1,974,792	-				+0.5