Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS08805

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,893,168	+		HGI48_RS08800	0.29	-2.5
1,893,260	+		HGI48_RS08800	0.36	-0.9
1,893,414	+		HGI48_RS08800	0.49	-0.3
1,893,425	+				+0.5
1,893,426	-		HGI48_RS08800	0.50	-0.3
1,893,461	+		HGI48_RS08800	0.52	-1.0
1,894,103	+				+0.0
1,894,104	-				-1.0
1,894,104	-				+0.4
1,894,108	-				-0.9
1,894,148	-				+0.5
1,894,179	-				-0.7
1,894,246	+				+0.4
1,894,246	+				+0.5
1,894,247	-				+0.7
1,894,247	-				+0.5
1,894,288	+				+0.4
1,894,288	+				-0.5
1,894,288	+				-0.3
1,894,288	+				-0.0
1,894,288	+				+0.2
1,894,288	+				-1.0
1,894,289	-				+0.4
1,894,289	-				+0.8
1,894,289	-				+1.1
1,894,289	-				-0.0
1,894,289	-				+0.0
1,894,289	-				-0.0
1,894,290	+				+0.4
1,894,290	+				+0.3
1,894,291	-				+0.7
1,894,330	+		HGI48_RS08805	0.10	-1.1
1,894,420	+		HGI48_RS08805	0.16	-1.3
1,894,420	+				+1.9
1,894,421	-		HGI48_RS08805	0.16	-2.5
1,894,421	-		HGI48_RS08805	0.16	-0.3
1,894,421	-		HGI48_RS08805	0.16	+0.5
1,894,458	+		HGI48_RS08805	0.18	+0.1
1,894,567	+		HGI48_RS08805	0.25	+0.2
1,894,567	+		HGI48_RS08805	0.25	-1.2
1,894,567	+		HGI48_RS08805	0.25	-0.8
1,894,567	+		HGI48_RS08805	0.25	+0.3
1,894,567	+		HGI48_RS08805	0.25	+0.0
1,894,568	-				-1.0
1,894,631	-		HGI48_RS08805	0.29	+0.5
1,894,645	-		HGI48_RS08805	0.30	+1.4
1,894,690	+		HGI48_RS08805	0.33	+0.7
1,894,690	+		HGI48_RS08805	0.33	-0.1
1,894,690	+		HGI48_RS08805	0.33	-0.7
1,894,690	+		HGI48_RS08805	0.33	-1.0
1,894,691	-		HGI48_RS08805	0.33	-1.8
1,894,717	+		HGI48_RS08805	0.35	-1.5
1,894,801	+		HGI48_RS08805	0.40	+1.4
1,894,825	+		HGI48_RS08805	0.41	+1.4
1,894,976	+		HGI48_RS08805	0.51	+0.1
1,894,977	-		HGI48_RS08805	0.51	+0.7
1,895,041	-		HGI48_RS08805	0.55	+0.1
1,895,174	+				+0.5
1,895,175	-		HGI48_RS08805	0.63	-0.3
1,895,204	-		HGI48_RS08805	0.65	+0.1
1,895,204	-		HGI48_RS08805	0.65	+0.3
1,895,209	+		HGI48_RS08805	0.66	-0.1
1,895,209	+		HGI48_RS08805	0.66	-0.1
1,895,303	-		HGI48_RS08805	0.71	+0.8
1,895,383	+				+0.5
1,895,383	+		HGI48_RS08805	0.76	+0.3
1,895,384	-		HGI48_RS08805	0.77	-0.8
1,895,384	-		HGI48_RS08805	0.77	-0.8
1,895,499	+		HGI48_RS08805	0.84	+0.1
1,895,554	-				+0.5
1,895,606	+				+0.4
1,895,606	+				+0.4
1,895,606	+				-0.5
1,895,606	+				-1.6
1,895,607	-				+0.1
1,895,607	-				+0.8
1,895,608	+				+0.5
1,895,608	+				-0.7
1,895,609	-				-0.5
1,895,609	-				-0.5
1,895,691	+				-1.1
1,895,692	-				-0.8
1,895,815	+				-1.0
1,895,829	+				-0.8
1,895,829	+				-0.6
1,895,904	+				+0.2
1,895,938	+				-1.8
1,895,939	-				-0.3
1,895,939	-				-0.7
1,895,939	-				-0.5
1,895,939	-				-1.3
1,895,939	-				-1.3
1,895,949	+				+0.1
1,895,949	+				+1.3
1,895,950	-				-1.4
1,896,015	-				+0.4
1,896,015	-				+0.5
1,896,297	-		HGI48_RS08810	0.38	+0.1
1,896,307	+		HGI48_RS08810	0.39	+0.5
1,896,307	+		HGI48_RS08810	0.39	+1.0
1,896,307	+		HGI48_RS08810	0.39	+0.0
1,896,351	+		HGI48_RS08810	0.44	+0.7
1,896,574	+		HGI48_RS08810	0.68	-0.8
1,896,574	+		HGI48_RS08810	0.68	-0.0
1,896,668	-		HGI48_RS08810	0.78	-0.2
1,896,704	+		HGI48_RS08810	0.82	-1.5
1,896,704	+		HGI48_RS08810	0.82	+0.2
1,896,704	+		HGI48_RS08810	0.82	+1.8
1,896,704	+		HGI48_RS08810	0.82	+0.2
1,896,704	+		HGI48_RS08810	0.82	-1.8
1,896,704	+		HGI48_RS08810	0.82	-0.0
1,896,705	-		HGI48_RS08810	0.82	-0.5
1,896,705	-		HGI48_RS08810	0.82	-0.0
1,896,705	-		HGI48_RS08810	0.82	+0.8
1,896,705	-		HGI48_RS08810	0.82	-0.2
1,896,705	-		HGI48_RS08810	0.82	+1.2
1,896,740	+		HGI48_RS08810	0.86	-0.9
1,896,740	+		HGI48_RS08810	0.86	+0.4
1,896,740	+		HGI48_RS08810	0.86	-0.9
1,896,741	-		HGI48_RS08810	0.86	-0.0