Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS08620

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,851,055	+		HGI48_RS08610	0.74	-1.8
1,851,102	-		HGI48_RS08610	0.76	-0.2
1,851,102	-		HGI48_RS08610	0.76	-0.9
1,851,106	+		HGI48_RS08610	0.77	-0.4
1,851,107	-		HGI48_RS08610	0.77	-0.3
1,851,107	-		HGI48_RS08610	0.77	-0.7
1,851,107	-		HGI48_RS08610	0.77	+0.2
1,851,182	-		HGI48_RS08610	0.80	-0.4
1,851,182	-		HGI48_RS08610	0.80	+0.9
1,851,182	-		HGI48_RS08610	0.80	-2.3
1,851,225	+		HGI48_RS08610	0.82	-0.8
1,851,226	-		HGI48_RS08610	0.82	-0.6
1,851,253	+		HGI48_RS08610	0.83	-0.8
1,851,325	+		HGI48_RS08610	0.86	-1.4
1,851,325	+		HGI48_RS08610	0.86	-2.8
1,851,325	+		HGI48_RS08610	0.86	-1.0
1,851,325	+				+1.3
1,851,326	-		HGI48_RS08610	0.86	+0.3
1,851,326	-		HGI48_RS08610	0.86	-1.3
1,851,326	-		HGI48_RS08610	0.86	-1.8
1,851,343	+		HGI48_RS08610	0.87	+0.7
1,851,343	+		HGI48_RS08610	0.87	-0.4
1,851,344	-		HGI48_RS08610	0.87	+0.2
1,851,344	-		HGI48_RS08610	0.87	-1.2
1,851,344	-		HGI48_RS08610	0.87	-1.4
1,851,369	+		HGI48_RS08610	0.88	+1.3
1,851,369	+				-0.4
1,851,369	+		HGI48_RS08610	0.88	-2.0
1,851,370	-		HGI48_RS08610	0.88	+0.6
1,851,450	+				+0.8
1,851,450	+				-0.3
1,851,450	+				+0.6
1,851,469	+				+0.8
1,851,469	+				+0.7
1,851,470	-				+0.7
1,851,470	-				+0.6
1,851,470	-				-1.0
1,851,496	+				+1.1
1,851,501	+				+0.3
1,851,501	+				+0.6
1,851,502	-				-1.3
1,851,502	-				-0.7
1,851,502	-				-0.4
1,851,502	-				-1.3
1,851,502	-				+0.4
1,851,505	+				+0.5
1,851,558	-				-0.4
1,851,595	+				-1.2
1,851,599	+				+0.6
1,851,599	+				+0.3
1,851,600	-				-0.8
1,851,600	-				-2.0
1,851,600	-				-0.0
1,851,623	+				-1.0
1,851,623	+				-0.1
1,851,623	+				-0.8
1,851,624	-				-0.3
1,851,638	-				+0.3
1,851,689	+				+0.2
1,851,702	-				-0.2
1,851,736	+				-1.2
1,851,737	-				-1.0
1,851,887	-		HGI48_RS08615	0.62	+0.2
1,851,907	+		HGI48_RS08615	0.74	+0.2
1,851,946	-				-1.0
1,851,968	+				+0.0
1,851,968	+				+0.6
1,852,022	+				-1.2
1,852,022	+				+0.3
1,852,023	-				-1.8
1,852,023	-				+1.1
1,852,051	+				+1.6
1,852,253	+		HGI48_RS08620	0.42	-0.4
1,852,253	+		HGI48_RS08620	0.42	-1.3
1,852,254	-		HGI48_RS08620	0.42	-1.2
1,852,336	-		HGI48_RS08620	0.57	+0.3
1,852,397	+				+0.6
1,852,397	+		HGI48_RS08620	0.68	-0.0
1,852,397	+		HGI48_RS08620	0.68	-2.0
1,852,397	+		HGI48_RS08620	0.68	+0.3
1,852,397	+		HGI48_RS08620	0.68	-2.3
1,852,398	-		HGI48_RS08620	0.68	-1.0
1,852,461	+		HGI48_RS08620	0.79	-0.0
1,852,550	+				-2.0
1,852,550	+				+0.1
1,852,550	+				+1.2
1,852,551	-				-0.8
1,852,551	-				-1.0
1,852,553	+				-1.8
1,852,575	+				+0.1
1,852,613	+				-0.5
1,852,613	+				-1.0
1,852,613	+				-1.0
1,852,614	-				-1.3
1,852,622	+				-0.7
1,852,623	-				-0.4
1,852,647	+				-0.0
1,852,647	+				+0.4
1,852,647	+				+0.6
1,852,648	-				-1.1
1,852,681	-				+0.3
1,852,690	+				+1.6
1,852,690	+				+1.3
1,852,691	-				+1.0
1,852,694	+				-0.0
1,852,694	+				+0.8
1,852,726	+				-0.6
1,852,744	+				-0.0
1,852,744	+				-0.4
1,852,745	-				-0.6
1,852,795	+				+0.4
1,852,795	+				+0.2
1,852,795	+				-0.2
1,852,795	+				-1.4
1,852,795	+				+1.3
1,852,795	+				-0.8
1,852,796	-				-1.0
1,852,811	-				+1.4
1,852,915	+				-1.3
1,852,970	+		HGI48_RS08625	0.11	-0.7
1,853,024	+		HGI48_RS08625	0.16	+1.1
1,853,067	-		HGI48_RS08625	0.20	-1.4
1,853,125	+		HGI48_RS08625	0.25	+0.6
1,853,183	-		HGI48_RS08625	0.31	+0.6
1,853,213	-		HGI48_RS08625	0.34	+0.2
1,853,213	-		HGI48_RS08625	0.34	-1.5
1,853,216	+		HGI48_RS08625	0.34	-0.9
1,853,217	-		HGI48_RS08625	0.34	-0.4
1,853,391	+		HGI48_RS08625	0.51	+1.6
1,853,391	+		HGI48_RS08625	0.51	+0.6
1,853,402	+		HGI48_RS08625	0.52	-1.0
1,853,403	-				+1.3
1,853,403	-		HGI48_RS08625	0.52	+0.2
1,853,403	-				+1.1
1,853,436	-		HGI48_RS08625	0.55	-1.8
1,853,500	+		HGI48_RS08625	0.61	+0.6
1,853,523	+		HGI48_RS08625	0.63	+0.1
1,853,575	+		HGI48_RS08625	0.68	-0.5