Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS08445

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,811,839	+		HGI48_RS08435	0.90	-1.3
1,811,839	+		HGI48_RS08435	0.90	+0.1
1,811,840	-		HGI48_RS08435	0.90	-0.6
1,811,840	-		HGI48_RS08435	0.90	-0.3
1,811,842	+		HGI48_RS08435	0.90	-1.8
1,811,842	+				-0.0
1,811,842	+		HGI48_RS08435	0.90	+0.1
1,811,842	+		HGI48_RS08435	0.90	+0.9
1,811,843	-		HGI48_RS08435	0.90	-0.7
1,811,843	-		HGI48_RS08435	0.90	+0.1
1,811,843	-		HGI48_RS08435	0.90	-0.0
1,811,843	-		HGI48_RS08435	0.90	-0.3
1,811,845	+		HGI48_RS08435	0.90	+0.9
1,811,846	-				+0.1
1,812,039	+				+0.3
1,812,174	+		HGI48_RS08440	0.11	-3.0
1,812,174	+		HGI48_RS08440	0.11	-0.1
1,812,174	+		HGI48_RS08440	0.11	+0.6
1,812,174	+				+1.3
1,812,175	-		HGI48_RS08440	0.12	-0.4
1,812,175	-				+1.0
1,812,265	-		HGI48_RS08440	0.24	-0.6
1,812,265	-		HGI48_RS08440	0.24	-2.3
1,812,317	+		HGI48_RS08440	0.31	-0.7
1,812,318	-		HGI48_RS08440	0.31	-3.0
1,812,420	+		HGI48_RS08440	0.45	+1.4
1,812,420	+		HGI48_RS08440	0.45	-0.1
1,812,420	+		HGI48_RS08440	0.45	-1.0
1,812,421	-		HGI48_RS08440	0.45	+0.2
1,812,451	-		HGI48_RS08440	0.49	-0.0
1,812,527	-		HGI48_RS08440	0.60	-0.0
1,812,527	-		HGI48_RS08440	0.60	+0.6
1,812,774	+				+1.9
1,812,798	+				-0.3
1,812,869	+				-2.4
1,812,870	-				-0.4
1,812,870	-				-1.9
1,812,870	-				-3.0
1,812,959	+				-0.0
1,813,028	+		HGI48_RS08445	0.18	+0.1
1,813,028	+		HGI48_RS08445	0.18	+0.3
1,813,029	-		HGI48_RS08445	0.18	+1.0
1,813,029	-		HGI48_RS08445	0.18	+0.4
1,813,029	-		HGI48_RS08445	0.18	+0.6
1,813,047	-		HGI48_RS08445	0.19	-0.0
1,813,051	-		HGI48_RS08445	0.20	+1.6
1,813,051	-		HGI48_RS08445	0.20	-0.2
1,813,149	+		HGI48_RS08445	0.28	-2.3
1,813,149	+		HGI48_RS08445	0.28	+0.1
1,813,179	+		HGI48_RS08445	0.31	-1.0
1,813,179	+				+2.4
1,813,210	-				-0.4
1,813,219	-				+1.6
1,813,246	+		HGI48_RS08445	0.37	-0.4
1,813,247	-		HGI48_RS08445	0.37	-0.3
1,813,247	-		HGI48_RS08445	0.37	+0.6
1,813,247	-				-0.0
1,813,774	+				-1.0
1,813,775	-		HGI48_RS08445	0.82	+0.9
1,813,909	+				-0.6
1,813,909	+				+0.4
1,813,910	-				-0.7
1,813,910	-				+0.4
1,814,014	+				-1.3
1,814,014	+				+1.6
1,814,014	+				-0.2
1,814,257	+		HGI48_RS08450	0.38	-1.3
1,814,258	-		HGI48_RS08450	0.38	-1.9
1,814,258	-		HGI48_RS08450	0.38	-0.4
1,814,258	-		HGI48_RS08450	0.38	-1.3
1,814,285	-				-0.0
1,814,301	+		HGI48_RS08450	0.45	-0.4
1,814,365	+		HGI48_RS08450	0.54	+1.9
1,814,407	+		HGI48_RS08450	0.60	+0.3
1,814,408	-		HGI48_RS08450	0.60	-0.9
1,814,632	+				+1.0
1,814,632	+				-1.2
1,814,632	+				-1.3
1,814,633	-				-0.3
1,814,633	-				-0.2
1,814,633	-				+1.3
1,814,633	-				-0.0
1,814,633	-				-0.6
1,814,633	-				+1.0
1,814,635	-				+1.1
1,814,635	-				-1.2
1,814,703	+				-1.3
1,814,703	+				-0.9
1,814,704	-				-2.3
1,814,704	-				-0.8
1,814,706	+				+0.6
1,814,706	+				-0.6
1,814,706	+				-0.2
1,814,707	-				+1.0
1,814,722	-				-0.4
1,814,729	-				+0.2
1,814,815	+		HGI48_RS08455	0.14	+1.7
1,814,816	-		HGI48_RS08455	0.15	-1.0
1,814,876	+		HGI48_RS08455	0.21	+1.4
1,814,877	-		HGI48_RS08455	0.21	-2.3
1,814,924	+				-0.0
1,814,924	+		HGI48_RS08455	0.27	+0.6
1,814,940	+		HGI48_RS08455	0.29	-0.4
1,814,941	-		HGI48_RS08455	0.29	-0.2
1,814,949	+		HGI48_RS08455	0.30	-0.0
1,814,950	-		HGI48_RS08455	0.30	-0.7
1,814,952	-		HGI48_RS08455	0.30	-1.0