Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS07940

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,699,606	+		HGI48_RS07935	0.59	-0.7
1,699,677	+		HGI48_RS07935	0.64	+0.4
1,699,678	-		HGI48_RS07935	0.64	-0.3
1,699,678	-		HGI48_RS07935	0.64	-1.0
1,699,718	+		HGI48_RS07935	0.67	-0.4
1,699,772	+		HGI48_RS07935	0.71	-1.7
1,699,773	-		HGI48_RS07935	0.71	-0.3
1,699,773	-		HGI48_RS07935	0.71	-0.0
1,699,773	-		HGI48_RS07935	0.71	+0.9
1,699,773	-		HGI48_RS07935	0.71	-1.7
1,699,817	-		HGI48_RS07935	0.74	-2.0
1,699,915	+		HGI48_RS07935	0.81	-1.7
1,699,915	+		HGI48_RS07935	0.81	-1.2
1,699,926	+		HGI48_RS07935	0.81	+0.2
1,699,927	-		HGI48_RS07935	0.82	+0.7
1,699,957	-		HGI48_RS07935	0.84	+0.1
1,699,957	-		HGI48_RS07935	0.84	-1.7
1,699,957	-		HGI48_RS07935	0.84	-0.4
1,699,957	-		HGI48_RS07935	0.84	+0.6
1,700,011	+		HGI48_RS07935	0.88	-2.0
1,700,011	+		HGI48_RS07935	0.88	-0.6
1,700,012	-		HGI48_RS07935	0.88	-1.0
1,700,012	-		HGI48_RS07935	0.88	-0.8
1,700,058	+				-1.7
1,700,058	+				-0.3
1,700,072	-				-0.9
1,700,089	+				+0.2
1,700,089	+				-2.6
1,700,089	+				+0.7
1,700,089	+				-1.5
1,700,089	+				-2.6
1,700,090	-				-1.6
1,700,108	+				+0.1
1,700,109	-				+1.4
1,700,109	-				-1.1
1,700,109	-				-1.0
1,700,112	+				+0.2
1,700,112	+				+0.4
1,700,112	+				+2.2
1,700,143	+				-1.0
1,700,209	+				+0.3
1,700,210	-				+0.4
1,700,222	+				-0.0
1,700,222	+				-1.7
1,700,223	-				-1.7
1,700,241	+				+0.6
1,700,242	-				-0.1
1,700,336	+				-3.0
1,700,336	+				-1.4
1,700,336	+				-0.4
1,700,337	-				-0.2
1,700,341	-				-0.2
1,700,385	+				-0.0
1,700,385	+				-0.2
1,700,385	+				-0.6
1,700,388	+				+0.2
1,700,388	+				-1.2
1,700,388	+				-0.8
1,700,389	-				-0.2
1,700,389	-				-0.7
1,700,422	+				-0.4
1,700,422	+				+1.0
1,700,423	-				+0.2
1,700,435	+				+0.3
1,700,455	+				+0.4
1,700,455	+				+1.1
1,700,455	+				-1.0
1,700,455	+				+0.6
1,700,704	+				+1.9
1,700,704	+		HGI48_RS07940	0.14	-0.0
1,700,792	+		HGI48_RS07940	0.22	-2.4
1,700,792	+		HGI48_RS07940	0.22	-2.0
1,700,793	-		HGI48_RS07940	0.22	-2.2
1,700,793	-		HGI48_RS07940	0.22	+0.2
1,700,793	-		HGI48_RS07940	0.22	-1.2
1,700,793	-		HGI48_RS07940	0.22	-0.7
1,700,796	+		HGI48_RS07940	0.22	+0.2
1,700,796	+				-1.0
1,700,796	+				+1.3
1,700,796	+				+0.6
1,700,797	-		HGI48_RS07940	0.22	-0.3
1,700,797	-		HGI48_RS07940	0.22	-0.4
1,700,798	+		HGI48_RS07940	0.22	-0.7
1,700,798	+		HGI48_RS07940	0.22	+0.6
1,700,798	+		HGI48_RS07940	0.22	-1.4
1,700,798	+		HGI48_RS07940	0.22	+0.6
1,700,799	-		HGI48_RS07940	0.22	-1.3
1,700,799	-		HGI48_RS07940	0.22	+0.4
1,701,003	+		HGI48_RS07940	0.40	-1.0
1,701,003	+		HGI48_RS07940	0.40	+0.5
1,701,003	+		HGI48_RS07940	0.40	+0.8
1,701,003	+		HGI48_RS07940	0.40	-1.7
1,701,003	+		HGI48_RS07940	0.40	+0.4
1,701,003	+		HGI48_RS07940	0.40	+0.6
1,701,003	+		HGI48_RS07940	0.40	-1.7
1,701,003	+		HGI48_RS07940	0.40	-1.7
1,701,003	+				+1.0
1,701,003	+		HGI48_RS07940	0.40	-2.0
1,701,003	+				+1.3
1,701,003	+		HGI48_RS07940	0.40	-0.0
1,701,003	+		HGI48_RS07940	0.40	-1.0
1,701,003	+		HGI48_RS07940	0.40	+1.4
1,701,003	+		HGI48_RS07940	0.40	-1.7
1,701,004	-		HGI48_RS07940	0.40	-0.4
1,701,004	-		HGI48_RS07940	0.40	-0.7
1,701,004	-		HGI48_RS07940	0.40	-0.3
1,701,004	-		HGI48_RS07940	0.40	-0.4
1,701,004	-		HGI48_RS07940	0.40	-0.4
1,701,004	-		HGI48_RS07940	0.40	-0.4
1,701,004	-		HGI48_RS07940	0.40	+0.2
1,701,004	-		HGI48_RS07940	0.40	-0.1
1,701,004	-		HGI48_RS07940	0.40	+0.6
1,701,004	-		HGI48_RS07940	0.40	-0.4
1,701,004	-		HGI48_RS07940	0.40	-1.7
1,701,004	-		HGI48_RS07940	0.40	+0.7
1,701,014	+		HGI48_RS07940	0.41	-0.2
1,701,015	-				-1.0
1,701,105	-				-0.4
1,701,185	+				+1.0
1,701,186	-				+1.9
1,701,186	-				+0.6
1,701,373	+				-0.0
1,701,374	-		HGI48_RS07940	0.72	+0.1
1,701,374	-		HGI48_RS07940	0.72	+0.4
1,701,399	+		HGI48_RS07940	0.74	-1.4
1,701,572	-		HGI48_RS07940	0.89	-1.0
1,701,696	+				-1.0
1,701,696	+				-0.1
1,701,813	+				+1.9
1,701,830	+				-0.6
1,702,227	+				+1.3
1,702,242	+				-2.4
1,702,242	+				-1.4
1,702,242	+				-1.4
1,702,244	+				-0.7
1,702,276	+				+0.6
1,702,277	-				+1.6
1,702,306	+				-1.7
1,702,337	-				-0.4
1,702,490	+				-0.1
1,702,491	-				-0.0
1,702,491	-				+0.1
1,702,547	-				-0.4
1,702,547	-				-1.7
1,702,547	-				-1.2
1,702,557	+				+0.5
1,702,558	-				-0.9
1,702,558	-				+0.4
1,702,558	-				-0.2
1,702,628	-				+0.6
1,702,652	-				-1.7
1,702,652	-				+0.3
1,702,652	-				+0.4
1,702,660	-				-0.7