Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS06740

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,426,461	-		HGI48_RS06730	0.59	-2.2
1,426,461	-		HGI48_RS06730	0.59	+0.9
1,426,461	-		HGI48_RS06730	0.59	-1.2
1,426,461	-		HGI48_RS06730	0.59	-0.4
1,426,516	-				+0.6
1,426,738	-		HGI48_RS06730	0.83	+0.6
1,426,738	-		HGI48_RS06730	0.83	-0.5
1,426,738	-		HGI48_RS06730	0.83	-0.3
1,426,813	-		HGI48_RS06730	0.90	-0.7
1,426,813	-		HGI48_RS06730	0.90	+0.0
1,426,813	-		HGI48_RS06730	0.90	-0.6
1,426,813	-		HGI48_RS06730	0.90	-1.4
1,426,813	-		HGI48_RS06730	0.90	+0.6
1,426,932	+				+0.6
1,426,958	-				-1.2
1,426,958	-				-0.4
1,426,967	-				-0.3
1,426,982	-				-1.2
1,426,982	-				-1.1
1,426,982	-				-1.7
1,427,328	-		HGI48_RS06735	0.88	-0.7
1,427,328	-		HGI48_RS06735	0.88	-1.0
1,427,328	-		HGI48_RS06735	0.88	+0.8
1,427,328	-		HGI48_RS06735	0.88	+0.8
1,427,393	+				+1.6
1,427,393	+				+0.6
1,427,501	+				-0.5
1,427,502	-				+0.6
1,427,508	-				-3.0
1,427,539	-				-0.5
1,427,539	-				+1.0
1,427,540	+				-1.0
1,427,540	+				-0.5
1,427,541	-				-0.3
1,427,541	-				-0.4
1,427,562	+				+0.0
1,427,563	-				+0.6
1,427,563	-				+1.4
1,427,563	-				+1.8
1,427,563	-				+0.1
1,427,611	+				-0.6
1,427,621	+		HGI48_RS06740	0.10	+0.3
1,427,622	-				+1.0
1,427,635	+		HGI48_RS06740	0.11	-0.2
1,428,038	-		HGI48_RS06740	0.29	+0.4
1,428,038	-		HGI48_RS06740	0.29	-0.1
1,428,038	-		HGI48_RS06740	0.29	+0.3
1,428,038	-		HGI48_RS06740	0.29	-1.0
1,428,049	+		HGI48_RS06740	0.30	-2.7
1,428,082	+		HGI48_RS06740	0.31	-0.4
1,428,137	+		HGI48_RS06740	0.34	-0.1
1,428,137	+		HGI48_RS06740	0.34	+0.2
1,428,138	-		HGI48_RS06740	0.34	-1.1
1,428,138	-		HGI48_RS06740	0.34	-0.1
1,428,150	-		HGI48_RS06740	0.35	+0.1
1,428,150	-		HGI48_RS06740	0.35	-1.0
1,428,154	-		HGI48_RS06740	0.35	+0.1
1,428,261	-		HGI48_RS06740	0.40	-1.5
1,428,333	-		HGI48_RS06740	0.43	+0.5
1,428,396	+		HGI48_RS06740	0.46	-0.1
1,428,397	-				-1.0
1,428,397	-		HGI48_RS06740	0.46	+0.6
1,428,397	-				+0.0
1,428,398	+		HGI48_RS06740	0.46	+0.2
1,428,418	-		HGI48_RS06740	0.47	-0.8
1,428,489	-		HGI48_RS06740	0.50	+0.3
1,428,489	-		HGI48_RS06740	0.50	-0.5
1,428,489	-		HGI48_RS06740	0.50	-0.0
1,428,553	-		HGI48_RS06740	0.53	-0.1
1,428,553	-		HGI48_RS06740	0.53	-1.4
1,428,553	-		HGI48_RS06740	0.53	+0.6
1,428,563	-		HGI48_RS06740	0.53	-0.4
1,428,569	+				-0.4
1,428,570	-		HGI48_RS06740	0.54	+0.4
1,428,570	-		HGI48_RS06740	0.54	-0.5
1,428,591	-		HGI48_RS06740	0.55	+1.0
1,428,593	+		HGI48_RS06740	0.55	-1.0
1,428,594	-		HGI48_RS06740	0.55	-0.4
1,428,594	-		HGI48_RS06740	0.55	+0.3
1,428,594	-				-1.0
1,428,594	-		HGI48_RS06740	0.55	-0.6
1,428,600	-		HGI48_RS06740	0.55	+0.1
1,428,600	-		HGI48_RS06740	0.55	-0.3
1,428,600	-				-1.0
1,428,603	-				+2.0
1,428,646	+		HGI48_RS06740	0.57	-0.6
1,428,647	-		HGI48_RS06740	0.57	+0.5
1,428,682	+		HGI48_RS06740	0.59	+1.4
1,428,788	+		HGI48_RS06740	0.64	+1.1
1,428,789	-		HGI48_RS06740	0.64	-0.4
1,428,796	-		HGI48_RS06740	0.64	-2.7
1,428,796	-		HGI48_RS06740	0.64	-0.6
1,428,796	-		HGI48_RS06740	0.64	-0.7
1,428,796	-		HGI48_RS06740	0.64	-2.4
1,429,026	-		HGI48_RS06740	0.75	-0.5
1,429,026	-		HGI48_RS06740	0.75	-0.7
1,429,104	+		HGI48_RS06740	0.78	-1.4
1,429,105	-		HGI48_RS06740	0.78	+0.5
1,429,115	+				+0.6
1,429,115	+				+0.6
1,429,115	+		HGI48_RS06740	0.79	-0.4
1,429,115	+				+1.0
1,429,116	-		HGI48_RS06740	0.79	+1.0
1,429,116	-		HGI48_RS06740	0.79	-0.1
1,429,116	-		HGI48_RS06740	0.79	-1.0
1,429,116	-		HGI48_RS06740	0.79	-0.0
1,429,116	-		HGI48_RS06740	0.79	-0.4
1,429,116	-		HGI48_RS06740	0.79	+0.3
1,429,116	-		HGI48_RS06740	0.79	-0.6
1,429,116	-		HGI48_RS06740	0.79	-0.7
1,429,116	-		HGI48_RS06740	0.79	-0.8
1,429,124	+		HGI48_RS06740	0.79	+0.1
1,429,127	+		HGI48_RS06740	0.79	-0.3
1,429,127	+				+0.0
1,429,127	+		HGI48_RS06740	0.79	-1.4
1,429,128	-		HGI48_RS06740	0.79	-0.2
1,429,128	-		HGI48_RS06740	0.79	-0.4
1,429,208	+		HGI48_RS06740	0.83	+1.2
1,429,208	+		HGI48_RS06740	0.83	+0.2
1,429,208	+		HGI48_RS06740	0.83	-0.1
1,429,209	-		HGI48_RS06740	0.83	-0.8
1,429,209	-		HGI48_RS06740	0.83	-0.5
1,429,209	-		HGI48_RS06740	0.83	+0.4
1,429,209	-		HGI48_RS06740	0.83	-0.5
1,429,515	+				-2.2
1,429,537	-				-2.8
1,429,549	-				-0.1
1,429,573	+				+0.6
1,429,573	+				-0.8
1,429,706	-				-0.4
1,429,740	-				+1.2
1,429,810	+				+0.0
1,429,811	-				-1.7
1,429,831	+				+1.5
1,429,897	-				-0.5
1,429,925	-				-0.4
1,430,066	+		HGI48_RS06745	0.15	-0.7
1,430,066	+		HGI48_RS06745	0.15	-0.1
1,430,067	-		HGI48_RS06745	0.15	-0.3
1,430,149	-		HGI48_RS06745	0.20	-2.2
1,430,169	-		HGI48_RS06745	0.22	-1.4
1,430,199	+		HGI48_RS06745	0.24	+0.0
1,430,200	-		HGI48_RS06745	0.24	+0.6
1,430,252	-		HGI48_RS06745	0.28	-0.4
1,430,284	+		HGI48_RS06745	0.30	-0.4
1,430,285	-		HGI48_RS06745	0.30	-1.7
1,430,287	+		HGI48_RS06745	0.30	+0.3
1,430,341	+		HGI48_RS06745	0.34	-0.7
1,430,342	-		HGI48_RS06745	0.34	-1.0
1,430,427	+		HGI48_RS06745	0.40	+2.0
1,430,427	+		HGI48_RS06745	0.40	-0.2
1,430,428	-		HGI48_RS06745	0.40	+0.1
1,430,429	+		HGI48_RS06745	0.40	-0.7
1,430,430	-		HGI48_RS06745	0.40	+0.3
1,430,546	+		HGI48_RS06745	0.49	-0.7
1,430,546	+		HGI48_RS06745	0.49	+1.8
1,430,552	+		HGI48_RS06745	0.49	-1.7
1,430,553	-		HGI48_RS06745	0.49	-1.4
1,430,553	-				-1.0