Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS06705

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,418,436	+		HGI48_RS06700	0.39	-1.9
1,418,436	+		HGI48_RS06700	0.39	-0.9
1,418,436	+		HGI48_RS06700	0.39	+0.2
1,418,627	+				+1.6
1,418,628	-		HGI48_RS06700	0.57	+0.3
1,418,649	+		HGI48_RS06700	0.59	-1.5
1,418,840	+		HGI48_RS06700	0.76	-1.7
1,418,840	+		HGI48_RS06700	0.76	+0.1
1,418,840	+		HGI48_RS06700	0.76	-0.4
1,418,840	+		HGI48_RS06700	0.76	-0.8
1,418,840	+		HGI48_RS06700	0.76	-1.1
1,419,057	+				-1.0
1,419,058	-				-2.2
1,419,058	-				-0.6
1,419,088	+				+0.4
1,419,089	-				+0.2
1,419,181	+				-2.5
1,419,214	+				+2.0
1,419,232	+				-1.3
1,419,233	-				+1.0
1,419,240	+				+0.6
1,419,242	+				-0.4
1,419,243	-				-1.4
1,419,304	+				-0.6
1,419,349	+				+0.5
1,419,349	+				-0.1
1,419,349	+				+1.0
1,419,350	-				-0.7
1,419,350	-				+0.6
1,419,350	-				-1.1
1,419,364	-				+0.1
1,419,373	-				-1.1
1,419,399	+				-0.6
1,419,400	-				-1.0
1,419,400	-				+0.4
1,419,400	-				-1.4
1,419,476	-		HGI48_RS06705	0.13	-0.8
1,419,536	-		HGI48_RS06705	0.23	-0.5
1,419,536	-		HGI48_RS06705	0.23	-2.5
1,419,536	-		HGI48_RS06705	0.23	-2.4
1,419,536	-		HGI48_RS06705	0.23	+0.3
1,419,538	+		HGI48_RS06705	0.23	+0.0
1,419,538	+		HGI48_RS06705	0.23	+0.6
1,419,539	-		HGI48_RS06705	0.23	-0.4
1,419,539	-		HGI48_RS06705	0.23	+1.2
1,419,539	-		HGI48_RS06705	0.23	-0.8
1,419,539	-		HGI48_RS06705	0.23	-0.8
1,419,539	-		HGI48_RS06705	0.23	-1.5
1,419,539	-		HGI48_RS06705	0.23	-2.2
1,419,539	-				+2.2
1,419,586	+		HGI48_RS06705	0.30	-0.2
1,419,586	+		HGI48_RS06705	0.30	-1.7
1,419,586	+		HGI48_RS06705	0.30	-0.5
1,419,674	-		HGI48_RS06705	0.44	-0.5
1,419,674	-		HGI48_RS06705	0.44	+0.4
1,419,674	-		HGI48_RS06705	0.44	-0.4
1,419,674	-		HGI48_RS06705	0.44	-1.7
1,419,679	+		HGI48_RS06705	0.45	-1.1
1,419,679	+		HGI48_RS06705	0.45	-1.4
1,419,679	+		HGI48_RS06705	0.45	-1.7
1,419,680	-		HGI48_RS06705	0.45	-3.0
1,419,680	-		HGI48_RS06705	0.45	+0.3
1,419,680	-		HGI48_RS06705	0.45	-0.4
1,419,680	-		HGI48_RS06705	0.45	-0.0
1,419,819	+		HGI48_RS06705	0.67	-0.8
1,419,819	+		HGI48_RS06705	0.67	-2.0
1,419,947	-		HGI48_RS06705	0.87	-1.0
1,420,037	+				-0.5
1,420,037	+				-1.4
1,420,037	+				-2.4
1,420,038	-				+2.0
1,420,038	-				+0.3
1,420,045	+				-1.0
1,420,046	-				-1.4
1,420,046	-				+0.3
1,420,046	-				+0.6
1,420,046	-				+0.6
1,420,077	+				-1.4
1,420,262	+		HGI48_RS06710	0.22	-1.7
1,420,266	+		HGI48_RS06710	0.23	+0.2
1,420,276	-		HGI48_RS06710	0.24	-0.2
1,420,276	-		HGI48_RS06710	0.24	-1.4
1,420,669	+				-0.4
1,420,670	-				-0.5
1,420,715	-				+0.2
1,420,715	-				+0.6
1,420,715	-				-0.0
1,420,715	-				+0.4
1,420,848	+				+1.2
1,420,848	+				-0.0
1,420,848	+				+0.4
1,420,848	+				-0.6
1,420,848	+				-0.7
1,420,848	+				-0.2
1,420,848	+				-0.2
1,420,848	+				-0.7
1,420,848	+				-0.4
1,420,848	+				-0.4
1,420,848	+				-0.5
1,420,848	+				-0.7
1,420,849	-				-0.2
1,420,849	-				+0.9
1,420,849	-				+0.6
1,420,849	-				+0.1
1,420,849	-				+0.6
1,420,849	-				-0.7
1,420,849	-				+0.1
1,420,849	-				+1.0
1,420,849	-				-0.3
1,420,849	-				-0.4
1,420,849	-				+1.0
1,420,849	-				+0.6
1,420,850	+				-0.1
1,420,850	+				+1.6
1,420,850	+				-1.4
1,420,850	+				-0.1
1,420,851	-				+1.4
1,420,851	-				+1.2
1,420,851	-				+0.3
1,420,851	-				-0.6
1,420,851	-				-1.2
1,420,851	-				+0.3
1,420,851	-				-2.1
1,421,000	+		HGI48_RS06715	0.14	-0.5