Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS06500

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,376,969	-				-0.3
1,376,972	+				-0.9
1,376,973	-				-1.7
1,376,973	-				-2.1
1,376,973	-				-0.3
1,376,975	+				-0.1
1,376,975	+				+1.0
1,376,975	+				-1.1
1,376,976	-				-1.3
1,376,976	-				-0.3
1,376,976	-				+1.1
1,376,991	+				-0.1
1,376,992	-				-1.6
1,376,992	-				+0.4
1,376,992	-				-0.2
1,376,992	-				-0.5
1,376,992	-				+0.7
1,376,992	-				+0.2
1,376,992	-				-1.9
1,377,039	+				-1.2
1,377,078	+				-1.9
1,377,078	+				-1.3
1,377,078	+				+0.3
1,377,079	-				+0.1
1,377,080	+				+0.1
1,377,080	+				+0.5
1,377,080	+				-0.5
1,377,080	+				-0.1
1,377,081	-				-1.4
1,377,081	-				-0.5
1,377,218	+		HGI48_RS06495	0.29	-1.3
1,377,236	+		HGI48_RS06495	0.31	-0.9
1,377,236	+		HGI48_RS06495	0.31	+0.4
1,377,237	-				-0.3
1,377,237	-		HGI48_RS06495	0.31	-0.5
1,377,239	+		HGI48_RS06495	0.32	-0.6
1,377,239	+		HGI48_RS06495	0.32	-1.6
1,377,239	+		HGI48_RS06495	0.32	-0.5
1,377,240	-		HGI48_RS06495	0.32	-0.5
1,377,240	-		HGI48_RS06495	0.32	-1.6
1,377,270	-		HGI48_RS06495	0.36	-1.1
1,377,270	-		HGI48_RS06495	0.36	+0.2
1,377,461	+		HGI48_RS06495	0.63	-0.1
1,377,461	+		HGI48_RS06495	0.63	-0.6
1,377,461	+		HGI48_RS06495	0.63	-0.3
1,377,461	+		HGI48_RS06495	0.63	-0.7
1,377,461	+				+1.3
1,377,461	+		HGI48_RS06495	0.63	-1.6
1,377,462	-		HGI48_RS06495	0.63	-0.5
1,377,462	-		HGI48_RS06495	0.63	-2.1
1,377,462	-		HGI48_RS06495	0.63	+0.2
1,377,462	-		HGI48_RS06495	0.63	-0.5
1,377,462	-				+0.1
1,377,462	-		HGI48_RS06495	0.63	-0.5
1,377,620	-		HGI48_RS06495	0.85	-0.6
1,377,620	-		HGI48_RS06495	0.85	-3.1
1,377,620	-				+1.1
1,377,620	-		HGI48_RS06495	0.85	-2.3
1,377,696	-				-0.1
1,377,696	-				-1.1
1,377,743	+				-0.4
1,377,743	+				+0.4
1,377,744	-				-0.6
1,377,744	-				-1.3
1,377,744	-				-0.2
1,377,823	-				-0.8
1,377,823	-				-1.3
1,377,839	+				+0.7
1,377,860	+				-0.3
1,377,860	+				-0.1
1,377,860	+				-0.0
1,377,902	+				-0.3
1,377,904	+				-0.5
1,377,915	+				-2.1
1,377,915	+				-1.3
1,377,915	+				+0.7
1,377,915	+				-1.1
1,377,915	+				-0.3
1,377,915	+				-0.6
1,377,915	+				-0.3
1,377,916	-				+0.1
1,377,916	-				-0.1
1,377,948	+				-0.2
1,377,951	+				+1.0
1,378,862	+		HGI48_RS06500	0.32	-1.8
1,380,773	+				+0.1
1,380,773	+				+1.2
1,380,787	+				-2.3