Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS06485

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,373,933	-				-0.9
1,373,933	-				-1.3
1,373,975	-				-0.0
1,373,990	-				+0.2
1,374,029	-				+0.2
1,374,045	-				-0.1
1,374,045	-				-0.2
1,374,051	-				+0.5
1,374,051	-				-0.2
1,374,054	+				+0.9
1,374,055	-				-0.8
1,374,055	-				-1.1
1,374,055	-				-0.5
1,374,058	-				+0.3
1,374,095	-				+0.2
1,374,095	-				-0.3
1,374,174	-				-0.3
1,374,182	-				-0.2
1,374,204	+				+0.3
1,374,278	+				-1.3
1,374,304	+				-0.6
1,374,561	+				-0.9
1,374,588	+		HGI48_RS06480	0.27	-1.3
1,374,589	-		HGI48_RS06480	0.28	-0.7
1,374,606	+		HGI48_RS06480	0.32	+0.1
1,374,611	+		HGI48_RS06480	0.33	-1.6
1,374,612	-		HGI48_RS06480	0.34	-0.1
1,374,732	+		HGI48_RS06480	0.64	-1.8
1,374,733	-		HGI48_RS06480	0.65	-0.1
1,374,737	+				+1.3
1,374,738	-		HGI48_RS06480	0.66	-2.9
1,374,738	-				-0.3
1,374,868	+				+0.1
1,374,869	-				-2.1
1,374,894	-				-2.1
1,374,894	-				-1.6
1,374,913	+		HGI48_RS06485	0.14	-0.1
1,374,914	-		HGI48_RS06485	0.14	-0.3
1,374,916	+		HGI48_RS06485	0.15	-0.5
1,374,916	+		HGI48_RS06485	0.15	-1.9
1,374,949	-		HGI48_RS06485	0.24	-0.9
1,374,949	-				+0.1
1,374,957	+		HGI48_RS06485	0.27	+0.1
1,374,957	+		HGI48_RS06485	0.27	-1.9
1,374,957	+				+0.1
1,374,959	+		HGI48_RS06485	0.27	-0.6
1,375,032	-		HGI48_RS06485	0.48	-2.4
1,375,173	+		HGI48_RS06485	0.89	-0.5
1,375,173	+		HGI48_RS06485	0.89	-1.1
1,375,173	+		HGI48_RS06485	0.89	-2.5
1,375,173	+		HGI48_RS06485	0.89	-2.3
1,375,173	+		HGI48_RS06485	0.89	-1.1
1,375,174	-		HGI48_RS06485	0.89	-1.6
1,375,399	+				-0.9
1,375,418	+		HGI48_RS06490	0.12	+0.3
1,375,418	+		HGI48_RS06490	0.12	-1.2
1,375,418	+		HGI48_RS06490	0.12	-0.1
1,375,418	+		HGI48_RS06490	0.12	+0.7
1,375,418	+		HGI48_RS06490	0.12	-1.5
1,375,419	-		HGI48_RS06490	0.12	-0.6
1,375,419	-		HGI48_RS06490	0.12	-0.9
1,375,419	-				+0.7
1,375,419	-		HGI48_RS06490	0.12	+0.0
1,375,469	+		HGI48_RS06490	0.15	-0.5
1,375,469	+		HGI48_RS06490	0.15	-0.3
1,375,469	+		HGI48_RS06490	0.15	-0.7
1,375,469	+		HGI48_RS06490	0.15	+0.0
1,375,470	-		HGI48_RS06490	0.15	+0.7
1,375,470	-		HGI48_RS06490	0.15	-1.5
1,375,471	+		HGI48_RS06490	0.15	+0.1
1,375,471	+		HGI48_RS06490	0.15	+0.7
1,375,472	-		HGI48_RS06490	0.15	-1.1
1,375,472	-		HGI48_RS06490	0.15	-0.9
1,375,554	-		HGI48_RS06490	0.19	-0.6
1,375,831	+		HGI48_RS06490	0.35	-0.9
1,375,831	+		HGI48_RS06490	0.35	-1.9
1,375,835	+		HGI48_RS06490	0.35	-0.6
1,375,836	-		HGI48_RS06490	0.35	+0.7
1,376,073	+		HGI48_RS06490	0.49	-0.9
1,376,073	+		HGI48_RS06490	0.49	+1.2
1,376,074	-		HGI48_RS06490	0.49	+1.0
1,376,076	+		HGI48_RS06490	0.49	+2.0
1,376,077	-		HGI48_RS06490	0.49	-2.9
1,376,077	-		HGI48_RS06490	0.49	-0.3