Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS06465

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,369,729	-		HGI48_RS06455	0.72	-1.3
1,369,826	-		HGI48_RS06455	0.85	-0.9
1,369,826	-		HGI48_RS06455	0.85	+0.0
1,369,914	+				+0.7
1,369,915	-				+1.7
1,369,915	-				-1.1
1,369,915	-				+1.1
1,369,915	-				+0.7
1,369,915	-				+0.1
1,369,915	-				-0.3
1,369,915	-				+0.4
1,369,936	+				+0.1
1,369,937	-				-0.8
1,370,026	+				-1.4
1,370,026	+				-1.0
1,370,026	+				-0.9
1,370,027	-				+0.0
1,370,160	+		HGI48_RS06460	0.23	+0.1
1,370,209	-		HGI48_RS06460	0.30	-1.6
1,370,209	-				+0.7
1,370,290	+		HGI48_RS06460	0.43	-1.8
1,370,290	+		HGI48_RS06460	0.43	-2.0
1,370,383	+		HGI48_RS06460	0.57	-0.2
1,370,384	-		HGI48_RS06460	0.57	-0.9
1,370,392	+		HGI48_RS06460	0.58	+0.1
1,370,392	+		HGI48_RS06460	0.58	-1.0
1,370,392	+		HGI48_RS06460	0.58	-0.3
1,370,392	+		HGI48_RS06460	0.58	-1.2
1,370,393	-				-0.9
1,370,393	-		HGI48_RS06460	0.58	-0.3
1,370,393	-		HGI48_RS06460	0.58	+0.6
1,370,393	-		HGI48_RS06460	0.58	-0.3
1,370,608	-				-0.6
1,370,608	-				+1.5
1,370,608	-				-0.7
1,370,660	+				+0.4
1,370,660	+				-0.3
1,370,660	+				-0.9
1,370,660	+				+0.1
1,370,660	+				-1.0
1,370,660	+				-1.1
1,370,661	-				-1.5
1,370,661	-				-2.3
1,370,661	-				-0.3
1,370,661	-				+1.3
1,370,661	-				+0.4
1,370,825	+		HGI48_RS06465	0.18	-0.7
1,370,826	-		HGI48_RS06465	0.18	+0.1
1,370,826	-		HGI48_RS06465	0.18	+1.6
1,370,826	-		HGI48_RS06465	0.18	-0.3
1,370,902	+		HGI48_RS06465	0.26	+0.1
1,370,903	-		HGI48_RS06465	0.26	-0.3
1,370,903	-				-0.3
1,370,903	-		HGI48_RS06465	0.26	+0.4
1,370,994	+				+0.7
1,370,994	+		HGI48_RS06465	0.36	+1.1
1,370,994	+		HGI48_RS06465	0.36	-1.1
1,370,994	+		HGI48_RS06465	0.36	-0.1
1,370,995	-		HGI48_RS06465	0.36	-0.5
1,370,995	-		HGI48_RS06465	0.36	-1.3
1,371,104	+		HGI48_RS06465	0.48	-0.1
1,371,104	+		HGI48_RS06465	0.48	-2.1
1,371,105	-		HGI48_RS06465	0.48	+0.0
1,371,105	-		HGI48_RS06465	0.48	-1.0
1,371,204	+		HGI48_RS06465	0.58	+0.7
1,371,205	-		HGI48_RS06465	0.58	-0.3
1,371,459	+		HGI48_RS06465	0.86	-0.3
1,371,459	+		HGI48_RS06465	0.86	-1.4
1,371,460	-		HGI48_RS06465	0.86	-0.6
1,371,460	-		HGI48_RS06465	0.86	+0.7
1,371,476	-				+3.0
1,371,476	-		HGI48_RS06465	0.88	+0.3
1,371,584	+				+0.7
1,371,584	+				-0.3
1,371,584	+				-1.1
1,371,584	+				+0.1
1,371,585	-				-0.6
1,371,638	+				+0.9
1,371,638	+				-0.5
1,371,639	-				+0.7
1,371,639	-				+0.3
1,371,814	+		HGI48_RS06470	0.32	+0.4
1,371,814	+		HGI48_RS06470	0.32	-0.3
1,371,829	+		HGI48_RS06470	0.34	-0.7
1,371,907	+		HGI48_RS06470	0.44	+0.3
1,371,908	-		HGI48_RS06470	0.44	+0.7
1,372,068	+		HGI48_RS06470	0.66	+0.2
1,372,068	+		HGI48_RS06470	0.66	-0.0
1,372,068	+		HGI48_RS06470	0.66	-0.8
1,372,068	+		HGI48_RS06470	0.66	+1.3
1,372,069	-		HGI48_RS06470	0.66	-0.9
1,372,069	-		HGI48_RS06470	0.66	-0.1
1,372,069	-		HGI48_RS06470	0.66	-1.3
1,372,069	-		HGI48_RS06470	0.66	-1.6
1,372,069	-		HGI48_RS06470	0.66	+0.4
1,372,069	-		HGI48_RS06470	0.66	-0.2
1,372,072	+		HGI48_RS06470	0.67	-0.7
1,372,073	-		HGI48_RS06470	0.67	+0.7
1,372,073	-				+1.4
1,372,291	+				-1.6
1,372,298	+				-0.9
1,372,298	+				+0.1
1,372,298	+				+0.7
1,372,299	-				-1.5
1,372,409	+				-0.1
1,372,409	+				-0.7
1,372,410	-				-1.6
1,372,410	-				+0.1
1,372,410	-				+0.9
1,372,471	+				+0.5
1,372,471	+				+0.1
1,372,472	-				-1.0
1,372,472	-				+0.3
1,372,472	-				+0.5
1,372,472	-				-0.9
1,372,478	+				-0.9
1,372,479	-				-0.2