Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS05975

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,270,351	+		HGI48_RS05965	0.80	-0.3
1,270,352	-		HGI48_RS05965	0.80	-2.1
1,270,500	+				-0.1
1,270,521	+				+0.0
1,270,521	+				-0.3
1,271,001	+		HGI48_RS05970	0.59	-1.3
1,271,001	+				+0.1
1,271,002	-		HGI48_RS05970	0.59	+0.0
1,271,002	-		HGI48_RS05970	0.59	+0.2
1,271,002	-		HGI48_RS05970	0.59	-0.4
1,271,002	-		HGI48_RS05970	0.59	-0.9
1,271,002	-		HGI48_RS05970	0.59	+0.1
1,271,061	+		HGI48_RS05970	0.66	-0.4
1,271,061	+		HGI48_RS05970	0.66	-0.4
1,271,062	-		HGI48_RS05970	0.66	-0.2
1,271,265	+		HGI48_RS05970	0.90	+0.7
1,271,265	+		HGI48_RS05970	0.90	+0.3
1,271,265	+		HGI48_RS05970	0.90	+0.1
1,271,266	-				+0.7
1,271,266	-				-1.3
1,271,266	-				+0.5
1,271,266	-				+2.0
1,271,266	-				-1.1
1,271,376	-				-0.9
1,271,443	+				-0.1
1,271,664	-		HGI48_RS05975	0.32	+0.4
1,271,669	-		HGI48_RS05975	0.33	-0.3
1,271,703	+		HGI48_RS05975	0.36	+0.7
1,271,704	-		HGI48_RS05975	0.36	+0.3
1,271,745	+		HGI48_RS05975	0.41	-0.4
1,271,745	+		HGI48_RS05975	0.41	-0.9
1,271,745	+		HGI48_RS05975	0.41	-1.0
1,271,746	-		HGI48_RS05975	0.41	-0.1
1,271,759	+		HGI48_RS05975	0.42	-0.1
1,271,759	+		HGI48_RS05975	0.42	+0.1
1,271,759	+		HGI48_RS05975	0.42	-1.3
1,271,760	-		HGI48_RS05975	0.42	+0.6
1,271,760	-		HGI48_RS05975	0.42	-0.6
1,271,780	-		HGI48_RS05975	0.44	-0.3
1,271,784	+		HGI48_RS05975	0.45	+1.4
1,271,785	-		HGI48_RS05975	0.45	+0.1
1,271,785	-		HGI48_RS05975	0.45	-0.0
1,271,879	+		HGI48_RS05975	0.54	+0.3
1,271,879	+		HGI48_RS05975	0.54	-1.1
1,272,043	+		HGI48_RS05975	0.71	-0.2
1,272,044	-		HGI48_RS05975	0.72	-0.5
1,272,044	-		HGI48_RS05975	0.72	+1.4
1,272,046	+				-0.9
1,272,046	+		HGI48_RS05975	0.72	-0.2
1,272,046	+		HGI48_RS05975	0.72	-1.3
1,272,046	+		HGI48_RS05975	0.72	-0.3
1,272,047	-		HGI48_RS05975	0.72	-0.0
1,272,047	-		HGI48_RS05975	0.72	-1.0
1,272,047	-		HGI48_RS05975	0.72	+1.6
1,272,047	-		HGI48_RS05975	0.72	-1.3
1,272,047	-		HGI48_RS05975	0.72	+0.3
1,272,047	-		HGI48_RS05975	0.72	-1.0
1,272,220	+		HGI48_RS05975	0.90	+1.6
1,272,221	-		HGI48_RS05975	0.90	+0.3
1,272,229	+				-0.0
1,272,230	-				-1.3
1,272,420	+				-1.7
1,272,420	+				+1.0
1,272,420	+				-0.3
1,272,421	-				-1.6
1,272,421	-				-0.7
1,272,501	+		HGI48_RS05980	0.14	-2.3
1,272,502	-		HGI48_RS05980	0.14	-2.6
1,272,502	-		HGI48_RS05980	0.14	-0.6
1,272,573	+		HGI48_RS05980	0.19	-1.6
1,272,573	+		HGI48_RS05980	0.19	+0.6
1,272,634	+				+1.9
1,272,634	+		HGI48_RS05980	0.24	-0.4
1,272,634	+		HGI48_RS05980	0.24	-0.3
1,272,634	+		HGI48_RS05980	0.24	+1.0
1,272,634	+		HGI48_RS05980	0.24	-0.4
1,272,635	-		HGI48_RS05980	0.24	-1.6
1,272,655	-		HGI48_RS05980	0.25	-0.2
1,272,655	-		HGI48_RS05980	0.25	-0.6
1,272,655	-		HGI48_RS05980	0.25	-0.6
1,272,771	+		HGI48_RS05980	0.34	+0.1
1,272,771	+		HGI48_RS05980	0.34	-0.3
1,272,771	+		HGI48_RS05980	0.34	-0.3
1,272,772	-				+1.1
1,272,772	-		HGI48_RS05980	0.34	-0.9
1,272,772	-		HGI48_RS05980	0.34	-2.5
1,272,772	-		HGI48_RS05980	0.34	-1.2
1,272,772	-				+0.1
1,272,963	+				+0.7
1,272,963	+		HGI48_RS05980	0.48	-0.3
1,272,963	+		HGI48_RS05980	0.48	-0.3
1,272,964	-		HGI48_RS05980	0.48	-2.3
1,272,964	-		HGI48_RS05980	0.48	-1.1