Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS05815

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,226,465	+		HGI48_RS05805	0.80	+0.2
1,226,591	-		HGI48_RS05805	0.83	+1.4
1,226,734	+		HGI48_RS05805	0.87	+0.6
1,226,734	+		HGI48_RS05805	0.87	-1.9
1,226,826	-				-0.5
1,226,863	-				-0.6
1,226,863	-				-1.3
1,226,863	-				+1.0
1,226,879	-				-0.1
1,226,963	+				-0.9
1,226,963	+				-1.9
1,226,964	-				+0.3
1,226,964	-				+0.2
1,226,964	-				-2.3
1,226,990	+				-0.1
1,226,990	+				-1.3
1,226,991	-				+0.7
1,227,043	+				-3.0
1,227,075	-				-0.4
1,227,075	-				+0.9
1,227,075	-				-1.3
1,227,111	+				+0.3
1,227,112	-				+1.1
1,227,160	-				+1.3
1,227,174	+				-1.6
1,227,175	-				+1.7
1,227,175	-				-0.9
1,227,175	-				+1.3
1,227,311	+		HGI48_RS05810	0.55	-2.1
1,227,312	-		HGI48_RS05810	0.55	-1.3
1,227,394	+				-0.2
1,227,431	+				-0.7
1,227,431	+				-0.3
1,227,432	-				-0.9
1,227,432	-				+0.1
1,227,432	-				-0.3
1,227,432	-				-1.8
1,227,465	+				-1.6
1,227,465	+				-0.2
1,227,806	+		HGI48_RS05815	0.64	-1.3
1,227,806	+		HGI48_RS05815	0.64	-1.4
1,227,806	+		HGI48_RS05815	0.64	+1.3
1,227,806	+		HGI48_RS05815	0.64	+0.7
1,227,807	-		HGI48_RS05815	0.64	+1.0
1,227,807	-		HGI48_RS05815	0.64	-2.3
1,227,810	+		HGI48_RS05815	0.65	+0.7
1,227,810	+		HGI48_RS05815	0.65	-0.6
1,227,811	-		HGI48_RS05815	0.65	-0.3
1,227,811	-		HGI48_RS05815	0.65	-1.6
1,227,811	-		HGI48_RS05815	0.65	-0.2
1,227,811	-		HGI48_RS05815	0.65	-0.7
1,227,811	-		HGI48_RS05815	0.65	-0.6
1,227,811	-		HGI48_RS05815	0.65	+1.0
1,227,811	-		HGI48_RS05815	0.65	+0.3
1,227,811	-		HGI48_RS05815	0.65	-1.6
1,227,811	-		HGI48_RS05815	0.65	-0.2
1,227,811	-		HGI48_RS05815	0.65	-0.0
1,227,811	-		HGI48_RS05815	0.65	+1.5
1,227,828	+		HGI48_RS05815	0.68	-2.6
1,227,828	+		HGI48_RS05815	0.68	-1.6
1,227,829	-		HGI48_RS05815	0.68	-2.3
1,227,829	-		HGI48_RS05815	0.68	+0.7
1,227,829	-		HGI48_RS05815	0.68	-1.3
1,227,832	+		HGI48_RS05815	0.69	+0.1
1,227,832	+		HGI48_RS05815	0.69	-1.5
1,227,832	+				+1.7
1,227,832	+		HGI48_RS05815	0.69	-1.1
1,227,832	+		HGI48_RS05815	0.69	-0.1
1,227,832	+		HGI48_RS05815	0.69	-2.2
1,227,832	+		HGI48_RS05815	0.69	-1.9
1,227,832	+		HGI48_RS05815	0.69	-1.0
1,227,833	-		HGI48_RS05815	0.69	-1.6
1,227,833	-		HGI48_RS05815	0.69	-0.0
1,227,833	-				-0.9
1,227,833	-		HGI48_RS05815	0.69	-2.9
1,227,833	-				-0.9
1,227,833	-		HGI48_RS05815	0.69	-1.6
1,228,031	-				-0.6
1,228,040	+				+1.1
1,228,041	-				-0.0
1,228,041	-				-0.6
1,228,125	+				+0.3
1,228,141	+				-2.1
1,228,141	+				-0.5
1,228,141	+				+0.1
1,228,141	+				+0.5
1,228,141	+				+0.3
1,228,141	+				-0.4
1,228,242	+				-0.5
1,228,242	+				-0.9
1,228,243	-				-1.9
1,228,243	-				-2.1
1,228,487	+		HGI48_RS05820	0.67	-0.7
1,228,571	+				+1.1
1,228,571	+				-0.2
1,228,571	+				-0.7
1,228,572	-				-0.6
1,228,572	-				-1.3
1,228,605	+				+0.7
1,228,762	+				-0.1
1,228,762	+				-0.9
1,228,762	+				+1.7
1,228,762	+				-0.9
1,228,762	+				-0.9
1,228,762	+				-1.1
1,228,764	+				+0.3
1,228,772	+				+0.2
1,228,772	+				-0.7
1,228,824	-				-2.7
1,228,867	+				-0.9
1,228,911	+		HGI48_RS05825	0.22	-1.3