Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS05045

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,056,343	+		HGI48_RS05035	0.44	-0.6
1,056,343	+				+0.8
1,056,343	+		HGI48_RS05035	0.44	+0.5
1,056,343	+		HGI48_RS05035	0.44	-1.8
1,056,344	-		HGI48_RS05035	0.44	-1.5
1,056,550	-		HGI48_RS05035	0.69	-1.0
1,056,607	+		HGI48_RS05035	0.76	-1.8
1,056,699	+		HGI48_RS05035	0.87	-1.0
1,056,699	+		HGI48_RS05035	0.87	-2.1
1,056,700	-		HGI48_RS05035	0.87	-0.3
1,056,700	-		HGI48_RS05035	0.87	-0.6
1,056,700	-		HGI48_RS05035	0.87	-1.0
1,056,700	-		HGI48_RS05035	0.87	-0.6
1,056,946	-		HGI48_RS05040	0.34	-0.9
1,057,218	+				+0.8
1,057,218	+				+1.3
1,057,218	+				-2.0
1,057,219	-				+0.4
1,057,219	-				-2.2
1,057,254	+				+0.2
1,057,254	+				-0.1
1,057,255	-				+0.5
1,057,310	+				-1.7
1,057,311	-				-0.6
1,057,312	+				-2.5
1,057,312	+				+0.3
1,057,312	+				+0.4
1,057,313	-				-1.2
1,057,313	-				-0.0
1,057,313	-				+0.8
1,057,440	+		HGI48_RS05045	0.16	-1.2
1,057,440	+		HGI48_RS05045	0.16	+1.0
1,057,440	+		HGI48_RS05045	0.16	-0.9
1,057,440	+		HGI48_RS05045	0.16	+0.5
1,057,440	+		HGI48_RS05045	0.16	-1.8
1,057,441	-		HGI48_RS05045	0.17	+0.8
1,057,454	+		HGI48_RS05045	0.18	-0.9
1,057,547	+		HGI48_RS05045	0.25	-0.4
1,057,548	-		HGI48_RS05045	0.25	-0.3
1,057,548	-		HGI48_RS05045	0.25	-0.0
1,057,668	-		HGI48_RS05045	0.35	-0.8
1,057,778	-		HGI48_RS05045	0.44	-0.6
1,057,778	-		HGI48_RS05045	0.44	-1.4
1,057,801	+		HGI48_RS05045	0.46	-0.4
1,057,801	+		HGI48_RS05045	0.46	-0.7
1,057,802	-				+0.2
1,057,898	+		HGI48_RS05045	0.54	-1.8
1,057,899	-		HGI48_RS05045	0.54	-0.3
1,058,012	+		HGI48_RS05045	0.64	-0.6
1,058,012	+		HGI48_RS05045	0.64	-1.4
1,058,012	+		HGI48_RS05045	0.64	-1.2
1,058,012	+		HGI48_RS05045	0.64	+1.5
1,058,146	+				+1.8
1,058,146	+		HGI48_RS05045	0.75	+1.0
1,058,147	-		HGI48_RS05045	0.75	-1.2
1,058,320	+				+2.0
1,058,320	+		HGI48_RS05045	0.89	-1.5
1,058,320	+				-0.2
1,058,321	-		HGI48_RS05045	0.89	-0.7
1,058,321	-		HGI48_RS05045	0.89	+0.9
1,058,323	+				+0.8
1,058,323	+		HGI48_RS05045	0.90	-0.8
1,058,323	+		HGI48_RS05045	0.90	-0.2
1,058,324	-		HGI48_RS05045	0.90	-0.6
1,058,503	+				+0.2
1,058,504	-				+2.2
1,058,539	+				-1.8
1,058,553	+				-0.0
1,058,553	+				-0.2
1,058,554	-				+0.8
1,058,554	-				+1.2
1,058,554	-				+1.1
1,058,558	+				-0.1
1,058,558	+				-1.5
1,058,558	+				-2.0
1,058,559	-				-1.5
1,058,559	-				-2.7
1,058,598	+				-0.2
1,058,600	-				-0.4
1,058,654	-				-0.2
1,058,654	-				-1.0
1,058,666	+				+1.0
1,058,666	+				-0.2
1,058,666	+				-0.4
1,058,666	+				-0.2
1,058,666	+				-0.5
1,058,666	+				-0.2
1,058,667	-				-1.8
1,058,667	-				-0.0
1,058,667	-				+1.8
1,058,672	+				+0.8
1,058,690	-				-0.7
1,058,721	+				-0.5
1,058,729	+				-0.6
1,058,729	+				-0.4
1,058,816	+				+0.8
1,058,816	+				+0.5
1,058,816	+				+0.2
1,058,816	+				-0.8
1,058,816	+				-0.8
1,058,816	+				+0.8
1,058,817	-				+0.2
1,058,817	-				+0.7
1,058,817	-				-0.3
1,058,817	-				-0.6
1,058,817	-				-0.6
1,058,818	+				-1.1
1,058,818	+				-0.2
1,058,818	+				-0.3
1,058,818	+				+2.9
1,058,819	-				+1.4
1,058,819	-				-1.0
1,058,819	-				-0.2
1,058,819	-				-0.3
1,058,819	-				-1.5
1,058,819	-				-0.8
1,058,819	-				+0.8
1,058,819	-				-0.5
1,058,819	-				+0.0
1,058,819	-				-0.5
1,058,819	-				-0.5
1,058,822	+				-0.5
1,058,822	+				-0.0
1,058,822	+				+0.9
1,058,822	+				+0.4
1,058,822	+				+0.2
1,058,822	+				+0.3
1,058,822	+				-0.6
1,058,822	+				+0.5
1,058,823	-				-0.4
1,058,852	+				-0.5
1,058,853	-				+0.4
1,058,853	-				-1.8
1,058,892	+				-0.9
1,059,137	+				+1.4
1,059,138	-		HGI48_RS05050	0.22	-0.6
1,059,188	-		HGI48_RS05050	0.28	-1.2
1,059,423	-				+0.2