Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS04940

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,036,241	+		HGI48_RS04935	0.26	-0.3
1,036,242	-		HGI48_RS04935	0.26	-0.2
1,036,242	-		HGI48_RS04935	0.26	-1.5
1,036,276	+		HGI48_RS04935	0.29	-0.3
1,036,276	+		HGI48_RS04935	0.29	-0.2
1,036,276	+		HGI48_RS04935	0.29	-0.8
1,036,276	+		HGI48_RS04935	0.29	+0.5
1,036,276	+		HGI48_RS04935	0.29	-0.5
1,036,277	-		HGI48_RS04935	0.30	-0.8
1,036,385	+		HGI48_RS04935	0.40	+0.1
1,036,385	+				-0.8
1,036,386	-		HGI48_RS04935	0.40	+0.2
1,036,386	-		HGI48_RS04935	0.40	-0.6
1,036,387	+				+0.8
1,036,388	-		HGI48_RS04935	0.40	+0.7
1,036,388	-				+0.2
1,036,486	+		HGI48_RS04935	0.50	-1.5
1,036,486	+				-0.8
1,036,487	-		HGI48_RS04935	0.50	-0.2
1,036,487	-		HGI48_RS04935	0.50	-1.3
1,036,567	+				+0.2
1,036,573	+		HGI48_RS04935	0.58	-0.6
1,036,573	+		HGI48_RS04935	0.58	-3.1
1,036,573	+		HGI48_RS04935	0.58	-0.1
1,036,574	-		HGI48_RS04935	0.58	-0.8
1,036,574	-		HGI48_RS04935	0.58	-0.5
1,036,574	-		HGI48_RS04935	0.58	+0.5
1,036,574	-		HGI48_RS04935	0.58	+0.0
1,036,574	-		HGI48_RS04935	0.58	-0.2
1,036,574	-		HGI48_RS04935	0.58	-1.4
1,036,624	+				+2.8
1,036,636	+		HGI48_RS04935	0.64	-1.6
1,036,636	+				-0.8
1,036,636	+		HGI48_RS04935	0.64	-1.0
1,036,636	+		HGI48_RS04935	0.64	+0.3
1,036,637	-		HGI48_RS04935	0.64	+0.4
1,036,637	-		HGI48_RS04935	0.64	-1.5
1,036,637	-		HGI48_RS04935	0.64	+1.1
1,036,682	+		HGI48_RS04935	0.68	-0.4
1,036,807	+		HGI48_RS04935	0.80	-1.1
1,036,807	+		HGI48_RS04935	0.80	-1.1
1,036,808	-		HGI48_RS04935	0.81	-0.8
1,036,808	-		HGI48_RS04935	0.81	-0.1
1,036,808	-		HGI48_RS04935	0.81	+0.0
1,036,808	-		HGI48_RS04935	0.81	+0.3
1,036,808	-		HGI48_RS04935	0.81	-0.7
1,036,808	-		HGI48_RS04935	0.81	+0.2
1,036,808	-		HGI48_RS04935	0.81	+0.5
1,036,967	+				+0.8
1,036,967	+				+0.2
1,036,967	+				-1.0
1,037,002	+				-1.7
1,037,002	+				-0.8
1,037,003	-				+0.8
1,037,003	-				+0.1
1,037,025	-				+2.1
1,037,068	+				-1.0
1,037,069	-				-1.7
1,037,069	-				+0.3
1,037,070	+				-0.0
1,037,070	+				+1.4
1,037,071	-				+0.4
1,037,071	-				-1.4
1,037,225	+				+0.1
1,037,225	+				-0.4
1,037,226	-				+0.8
1,037,226	-				-1.2
1,037,289	+		HGI48_RS04940	0.30	+0.9
1,037,290	-		HGI48_RS04940	0.30	-1.5
1,037,290	-		HGI48_RS04940	0.30	-0.5
1,037,290	-		HGI48_RS04940	0.30	-0.4
1,037,291	+		HGI48_RS04940	0.31	-1.5
1,037,291	+		HGI48_RS04940	0.31	+0.8
1,037,291	+		HGI48_RS04940	0.31	+0.5
1,037,291	+		HGI48_RS04940	0.31	-0.1
1,037,291	+		HGI48_RS04940	0.31	+0.3
1,037,292	-		HGI48_RS04940	0.31	-0.4
1,037,292	-				+1.8
1,037,372	+		HGI48_RS04940	0.68	-0.2
1,037,372	+		HGI48_RS04940	0.68	-0.3
1,037,372	+		HGI48_RS04940	0.68	-0.5
1,037,372	+		HGI48_RS04940	0.68	+0.4
1,037,372	+		HGI48_RS04940	0.68	+0.5
1,037,372	+		HGI48_RS04940	0.68	+0.5
1,037,372	+		HGI48_RS04940	0.68	+0.6
1,037,373	-		HGI48_RS04940	0.68	-0.2
1,037,373	-		HGI48_RS04940	0.68	-1.8
1,037,373	-				+0.2
1,037,373	-		HGI48_RS04940	0.68	-2.2
1,037,373	-		HGI48_RS04940	0.68	+0.8
1,037,373	-		HGI48_RS04940	0.68	-0.0
1,037,373	-		HGI48_RS04940	0.68	-1.7
1,037,373	-		HGI48_RS04940	0.68	-0.1
1,037,451	+				-0.2
1,037,458	+				-0.5
1,037,458	+				+0.4
1,037,459	-				-0.5
1,037,459	-				-0.4
1,037,459	-				-0.2
1,037,462	+				+0.8
1,037,491	+				-0.5
1,037,492	-				-0.8
1,037,523	+				+0.1
1,037,524	-				-0.4
1,037,672	+		HGI48_RS04945	0.11	+0.8
1,037,672	+		HGI48_RS04945	0.11	-0.8
1,037,672	+		HGI48_RS04945	0.11	-0.8
1,037,672	+				+1.2
1,037,673	-		HGI48_RS04945	0.11	+0.0
1,037,673	-		HGI48_RS04945	0.11	-1.0
1,037,673	-		HGI48_RS04945	0.11	+1.2
1,037,673	-		HGI48_RS04945	0.11	-1.6
1,037,678	+		HGI48_RS04945	0.11	-1.2
1,037,678	+		HGI48_RS04945	0.11	+0.6
1,037,678	+		HGI48_RS04945	0.11	-0.3
1,037,679	-		HGI48_RS04945	0.12	-0.1
1,037,679	-		HGI48_RS04945	0.12	+0.0
1,037,679	-		HGI48_RS04945	0.12	+0.5
1,037,679	-		HGI48_RS04945	0.12	-0.4
1,037,679	-		HGI48_RS04945	0.12	-2.5
1,037,679	-		HGI48_RS04945	0.12	-1.2
1,037,679	-		HGI48_RS04945	0.12	-0.3
1,037,847	+		HGI48_RS04945	0.35	-0.1
1,037,847	+		HGI48_RS04945	0.35	-1.3
1,037,847	+		HGI48_RS04945	0.35	-1.8
1,037,848	-		HGI48_RS04945	0.35	-1.9
1,037,848	-		HGI48_RS04945	0.35	-1.5
1,037,919	+		HGI48_RS04945	0.45	-3.1
1,037,919	+		HGI48_RS04945	0.45	+0.2
1,037,961	+		HGI48_RS04945	0.51	+0.1
1,037,961	+		HGI48_RS04945	0.51	-0.2
1,037,961	+		HGI48_RS04945	0.51	-1.4
1,037,961	+		HGI48_RS04945	0.51	-1.2
1,037,961	+		HGI48_RS04945	0.51	-0.5
1,037,962	-		HGI48_RS04945	0.51	-0.1
1,038,076	+		HGI48_RS04945	0.67	+0.1
1,038,076	+		HGI48_RS04945	0.67	+0.5
1,038,082	-		HGI48_RS04945	0.68	-1.0
1,038,235	+		HGI48_RS04945	0.89	-0.8
1,038,236	-		HGI48_RS04945	0.89	-1.5
1,038,256	+				+1.1
1,038,257	-				+1.3
1,038,257	-				+1.4
1,038,257	-				-0.4
1,038,261	+				+0.0
1,038,262	-				+0.5
1,038,262	-				-1.9
1,038,262	-				+0.1
1,038,313	+				+0.1
1,038,352	-				+0.8
1,038,386	+				-0.6
1,038,386	+				+0.7
1,038,386	+				+0.8
1,038,386	+				-0.6
1,038,387	-				+0.1
1,038,387	-				+0.0
1,038,387	-				+0.8
1,038,387	-				+0.1
1,038,412	+				-1.0
1,038,412	+				-0.8
1,038,412	+				-0.3
1,038,413	-				+1.2