Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS00450

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
112,021	+		HGI48_RS00445	0.14	+0.7
112,021	+		HGI48_RS00445	0.14	+0.8
112,022	-		HGI48_RS00445	0.15	-2.3
112,104	+		HGI48_RS00445	0.23	+0.1
112,126	-		HGI48_RS00445	0.26	+0.4
112,160	+		HGI48_RS00445	0.29	-1.0
112,160	+		HGI48_RS00445	0.29	-1.2
112,160	+		HGI48_RS00445	0.29	-0.3
112,161	-		HGI48_RS00445	0.29	-1.8
112,167	+		HGI48_RS00445	0.30	+0.7
112,168	-				-0.6
112,201	+		HGI48_RS00445	0.34	-1.0
112,201	+		HGI48_RS00445	0.34	-2.9
112,201	+		HGI48_RS00445	0.34	-0.4
112,202	-		HGI48_RS00445	0.34	+0.0
112,202	-		HGI48_RS00445	0.34	+0.4
112,202	-		HGI48_RS00445	0.34	+0.3
112,202	-		HGI48_RS00445	0.34	-1.8
112,202	-		HGI48_RS00445	0.34	-1.1
112,266	-		HGI48_RS00445	0.41	-1.0
112,267	+		HGI48_RS00445	0.41	-1.3
112,267	+		HGI48_RS00445	0.41	+0.4
112,267	+		HGI48_RS00445	0.41	-0.0
112,267	+		HGI48_RS00445	0.41	-0.3
112,268	-		HGI48_RS00445	0.41	-0.7
112,268	-		HGI48_RS00445	0.41	+0.6
112,278	+		HGI48_RS00445	0.42	-1.2
112,278	+		HGI48_RS00445	0.42	-0.4
112,278	+		HGI48_RS00445	0.42	+0.8
112,340	+		HGI48_RS00445	0.48	+0.6
112,340	+		HGI48_RS00445	0.48	+0.3
112,354	+		HGI48_RS00445	0.50	-0.3
112,355	-		HGI48_RS00445	0.50	-0.4
112,589	-		HGI48_RS00445	0.75	-1.2
112,589	-		HGI48_RS00445	0.75	-0.2
112,589	-				-0.6
112,589	-		HGI48_RS00445	0.75	-0.7
112,589	-		HGI48_RS00445	0.75	-1.0
112,592	+		HGI48_RS00445	0.75	-2.3
112,592	+		HGI48_RS00445	0.75	-1.3
112,593	-		HGI48_RS00445	0.75	-0.2
112,593	-		HGI48_RS00445	0.75	+0.3
112,593	-		HGI48_RS00445	0.75	-1.4
112,593	-		HGI48_RS00445	0.75	-0.3
112,593	-		HGI48_RS00445	0.75	+0.3
112,593	-		HGI48_RS00445	0.75	-0.3
112,593	-		HGI48_RS00445	0.75	-0.6
112,593	-		HGI48_RS00445	0.75	-0.3
112,635	+		HGI48_RS00445	0.80	-1.8
112,635	+		HGI48_RS00445	0.80	+0.3
112,636	-		HGI48_RS00445	0.80	-0.6
112,636	-				-0.6
112,636	-		HGI48_RS00445	0.80	-1.0
112,763	+				-0.4
112,763	+				-1.0
112,764	-				-0.3
112,764	-				+1.1
112,764	-				+0.5
112,767	-				+0.6
112,827	+				+0.0
112,828	-				-1.3
112,828	-				+0.2
112,828	-				-1.0
112,828	-				+0.4
112,828	-				+0.5
112,863	-				-0.7
112,881	-				-0.7
112,940	+				+0.2
112,940	+				-0.9
112,958	+				+1.0
113,104	+		HGI48_RS00450	0.28	+0.0
113,104	+		HGI48_RS00450	0.28	+0.6
113,104	+		HGI48_RS00450	0.28	-0.3
113,105	-		HGI48_RS00450	0.28	+1.8
113,105	-		HGI48_RS00450	0.28	+0.0
113,105	-				+2.8
113,105	-		HGI48_RS00450	0.28	-1.3
113,105	-		HGI48_RS00450	0.28	+1.2
113,411	+		HGI48_RS00450	0.67	+1.0
113,411	+		HGI48_RS00450	0.67	-0.3
113,411	+		HGI48_RS00450	0.67	-0.7
113,412	-		HGI48_RS00450	0.67	+1.3
113,412	-		HGI48_RS00450	0.67	-0.0
113,412	-		HGI48_RS00450	0.67	+1.2
113,412	-		HGI48_RS00450	0.67	-1.6
113,412	-		HGI48_RS00450	0.67	+0.6
113,412	-		HGI48_RS00450	0.67	-0.8
113,412	-		HGI48_RS00450	0.67	-0.8
113,412	-		HGI48_RS00450	0.67	-0.7
113,412	-				+1.0
113,502	-		HGI48_RS00450	0.78	-2.3
113,627	+				+0.0
113,627	+				-0.3
113,627	+				-1.1
113,628	-				+0.0
113,628	-				-1.1
113,639	+				+0.4
113,639	+				+0.3
113,639	+				-0.5
113,642	+				+0.5
113,642	+				-2.7
113,642	+				+0.2
113,643	-				-0.4
113,643	-				-0.8
113,708	-				-0.7
113,726	+				-0.6
113,726	+				+0.4
113,726	+				+0.0
113,726	+				-0.3
113,726	+				+0.2
113,727	-				-3.0
113,727	-				-1.5
113,757	+				+0.8
113,758	-				-0.6
113,805	+				+0.4
113,805	+				+0.7
113,917	+		HGI48_RS00455	0.17	+1.0
113,917	+		HGI48_RS00455	0.17	+0.8
113,917	+		HGI48_RS00455	0.17	-1.8
113,918	-		HGI48_RS00455	0.17	+1.3
113,918	-		HGI48_RS00455	0.17	-1.6
113,918	-		HGI48_RS00455	0.17	+0.6
113,918	-		HGI48_RS00455	0.17	-1.0
113,918	-		HGI48_RS00455	0.17	-0.5
113,950	-				+0.4
114,012	+		HGI48_RS00455	0.25	-1.4
114,012	+		HGI48_RS00455	0.25	+0.4
114,012	+		HGI48_RS00455	0.25	+1.0
114,012	+		HGI48_RS00455	0.25	-1.0
114,013	-		HGI48_RS00455	0.25	+0.7
114,013	-		HGI48_RS00455	0.25	-0.6
114,013	-		HGI48_RS00455	0.25	+0.3
114,013	-		HGI48_RS00455	0.25	-1.1
114,013	-		HGI48_RS00455	0.25	+0.2
114,013	-		HGI48_RS00455	0.25	-0.7
114,013	-		HGI48_RS00455	0.25	+0.6
114,013	-				+1.0
114,013	-		HGI48_RS00455	0.25	-2.1
114,013	-		HGI48_RS00455	0.25	-0.6
114,201	+		HGI48_RS00455	0.42	-0.8
114,301	+		HGI48_RS00455	0.50	-1.3
114,301	+				+2.8
114,301	+		HGI48_RS00455	0.50	-0.3
114,301	+		HGI48_RS00455	0.50	-0.3
114,301	+		HGI48_RS00455	0.50	-0.7
114,301	+				+1.0
114,302	-				+2.3
114,302	-		HGI48_RS00455	0.51	+1.3
114,302	-		HGI48_RS00455	0.51	+0.4
114,302	-		HGI48_RS00455	0.51	-0.1
114,426	+		HGI48_RS00455	0.61	-0.1
114,643	-				+0.0
114,643	-		HGI48_RS00455	0.80	+1.3
114,643	-		HGI48_RS00455	0.80	-0.7
114,643	-		HGI48_RS00455	0.80	-0.3
114,643	-		HGI48_RS00455	0.80	-0.7
114,667	+		HGI48_RS00455	0.82	+0.7
114,668	-		HGI48_RS00455	0.82	-0.0
114,669	+		HGI48_RS00455	0.82	-0.9
114,669	+		HGI48_RS00455	0.82	+0.3
114,670	-		HGI48_RS00455	0.82	+0.4