Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS00190

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
48,447	+				+1.8
48,448	-		HGI48_RS00185	0.41	+1.2
48,460	+		HGI48_RS00185	0.42	+0.4
48,532	+		HGI48_RS00185	0.46	-1.2
48,532	+		HGI48_RS00185	0.46	+0.5
48,533	-		HGI48_RS00185	0.46	+0.0
48,548	+		HGI48_RS00185	0.47	-1.1
48,729	-		HGI48_RS00185	0.58	-0.8
48,797	+		HGI48_RS00185	0.62	-2.1
48,817	+		HGI48_RS00185	0.64	-2.8
48,896	-		HGI48_RS00185	0.68	-1.6
48,896	-		HGI48_RS00185	0.68	-1.6
48,935	+		HGI48_RS00185	0.71	-0.5
48,936	-		HGI48_RS00185	0.71	-0.3
48,937	+		HGI48_RS00185	0.71	-0.3
48,938	-		HGI48_RS00185	0.71	+0.0
48,938	-		HGI48_RS00185	0.71	+0.9
49,038	-		HGI48_RS00185	0.77	+0.7
49,038	-		HGI48_RS00185	0.77	-0.7
49,082	-		HGI48_RS00185	0.80	-0.6
49,117	+		HGI48_RS00185	0.82	-0.6
49,117	+		HGI48_RS00185	0.82	-0.2
49,118	-		HGI48_RS00185	0.82	-0.1
49,154	-		HGI48_RS00185	0.84	-1.8
49,154	-		HGI48_RS00185	0.84	-1.1
49,247	-		HGI48_RS00185	0.89	+0.1
49,432	+				-0.2
49,432	+				-1.8
49,464	+				-0.0
49,465	-				+0.2
49,499	-		HGI48_RS00190	0.12	+0.3
49,528	+		HGI48_RS00190	0.17	+0.1
49,528	+				+1.0
49,550	+		HGI48_RS00190	0.20	+0.0
49,617	+		HGI48_RS00190	0.31	-0.2
49,657	+		HGI48_RS00190	0.37	-2.0
49,695	-		HGI48_RS00190	0.43	-0.6
49,702	+		HGI48_RS00190	0.44	-0.4
49,720	+		HGI48_RS00190	0.47	-2.0
49,720	+		HGI48_RS00190	0.47	-0.7
49,720	+		HGI48_RS00190	0.47	+1.9
49,720	+		HGI48_RS00190	0.47	-0.5
49,720	+		HGI48_RS00190	0.47	-1.1
49,721	-		HGI48_RS00190	0.47	+0.0
49,721	-		HGI48_RS00190	0.47	-1.0
49,721	-				+1.4
49,830	+		HGI48_RS00190	0.64	-1.1
49,830	+		HGI48_RS00190	0.64	-0.8
49,830	+		HGI48_RS00190	0.64	+0.6
49,831	-		HGI48_RS00190	0.64	-1.1
49,831	-		HGI48_RS00190	0.64	-0.6
49,831	-		HGI48_RS00190	0.64	-1.5
49,846	+		HGI48_RS00190	0.66	-0.7
49,863	+		HGI48_RS00190	0.69	+1.0
49,888	+		HGI48_RS00190	0.73	+0.5
49,888	+		HGI48_RS00190	0.73	-0.4
49,889	-		HGI48_RS00190	0.73	-0.8
49,907	-		HGI48_RS00190	0.75	-0.3
49,937	+		HGI48_RS00190	0.80	-0.1
49,937	+		HGI48_RS00190	0.80	+0.6
49,956	+		HGI48_RS00190	0.83	-0.7
49,957	-		HGI48_RS00190	0.83	-1.1
49,957	-		HGI48_RS00190	0.83	-1.1
49,960	-		HGI48_RS00190	0.84	-1.0
50,004	+				+0.4
50,004	+				-0.6
50,004	+				-0.6
50,004	+				+1.6
50,004	+				-0.2
50,005	-				-1.1
50,005	-				-0.6
50,005	-				+1.4
50,006	+				-1.3
50,006	+				-0.4
50,006	+				+0.7
50,007	-				-0.4
50,007	-				+0.0
50,007	-				+2.0
50,024	-				+0.5
50,049	-				+0.0
50,049	-				+1.0
50,049	-				-0.0
50,050	+				-1.3
50,060	+				-0.2
50,061	-				-0.5
50,061	-				-0.6
50,061	-				-0.5
50,064	-				+0.7
50,118	+				-0.6
50,119	-				-0.6
50,170	+		HGI48_RS00195	0.10	-0.3
50,170	+		HGI48_RS00195	0.10	+1.0
50,170	+		HGI48_RS00195	0.10	-0.9
50,170	+		HGI48_RS00195	0.10	+0.0
50,170	+		HGI48_RS00195	0.10	-0.2
50,171	-		HGI48_RS00195	0.11	+0.5
50,171	-		HGI48_RS00195	0.11	-1.6
50,171	-		HGI48_RS00195	0.11	+0.7
50,171	-		HGI48_RS00195	0.11	-0.9
50,171	-		HGI48_RS00195	0.11	+0.6
50,171	-				+3.0
50,174	+		HGI48_RS00195	0.11	+0.2
50,175	-		HGI48_RS00195	0.11	-0.3
50,175	-		HGI48_RS00195	0.11	-0.8
50,175	-		HGI48_RS00195	0.11	+0.6
50,175	-		HGI48_RS00195	0.11	-0.4
50,199	+		HGI48_RS00195	0.17	-0.3
50,218	+		HGI48_RS00195	0.21	+0.6
50,219	-		HGI48_RS00195	0.21	-3.0
50,219	-		HGI48_RS00195	0.21	-0.8
50,266	-		HGI48_RS00195	0.31	-1.4
50,302	+		HGI48_RS00195	0.39	+0.1
50,302	+		HGI48_RS00195	0.39	-2.1
50,302	+		HGI48_RS00195	0.39	+0.0
50,303	-		HGI48_RS00195	0.39	-0.6
50,337	+		HGI48_RS00195	0.47	-0.8
50,338	-		HGI48_RS00195	0.47	+0.0
50,393	-		HGI48_RS00195	0.59	-1.3
50,421	+		HGI48_RS00195	0.65	+0.0
50,448	+		HGI48_RS00195	0.71	-0.3
50,448	+		HGI48_RS00195	0.71	+0.2
50,448	+				+2.0
50,449	-		HGI48_RS00195	0.71	-1.6
50,449	-		HGI48_RS00195	0.71	+0.0
50,498	-		HGI48_RS00195	0.82	-1.0
50,531	+		HGI48_RS00195	0.89	-0.1
50,532	-		HGI48_RS00195	0.90	-1.0
50,640	+		HGI48_RS00200	0.12	-0.2
50,641	-		HGI48_RS00200	0.12	+0.2
50,790	+		HGI48_RS00200	0.38	-0.6
50,790	+		HGI48_RS00200	0.38	+0.1
50,790	+		HGI48_RS00200	0.38	+0.6
50,853	+		HGI48_RS00200	0.50	-1.0
50,854	-		HGI48_RS00200	0.50	+0.3
50,908	+				-0.6
50,970	-		HGI48_RS00200	0.70	+1.0