Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS00180

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
45,890	+		HGI48_RS00175	0.71	+0.8
45,890	+		HGI48_RS00175	0.71	+0.2
45,890	+		HGI48_RS00175	0.71	-1.1
45,890	+				+3.0
45,902	-		HGI48_RS00175	0.72	+1.0
46,005	+				+1.0
46,005	+		HGI48_RS00175	0.83	+0.0
46,005	+		HGI48_RS00175	0.83	-1.0
46,021	+		HGI48_RS00175	0.84	-0.2
46,022	-		HGI48_RS00175	0.84	-0.7
46,235	+				+0.8
46,236	-				+1.0
46,279	+				-0.8
46,279	+				-0.6
46,322	-				-0.3
46,332	-				+0.6
46,332	-				+0.8
46,408	+				-0.4
46,408	+				+1.0
46,409	-				+0.4
46,409	-				+0.6
46,409	-				-1.3
46,409	-				-1.8
46,409	-				+1.0
46,416	+				+0.4
46,416	+				-0.6
46,416	+				+1.9
46,416	+				-1.3
46,417	-				-2.1
46,417	-				+0.4
46,449	-				+0.0
46,543	-				+1.0
46,553	-				+0.6
46,554	+				+0.0
46,555	-				-0.8
46,655	+				+0.6
46,656	-				-0.2
46,658	+				+0.5
46,658	+				-1.2
46,658	+				-1.6
46,658	+				+0.4
46,658	+				-0.2
46,659	-				-0.8
46,659	-				+0.0
46,659	-				+0.5
46,659	-				+0.4
46,659	-				-0.6
46,693	-				-0.3
46,701	+				+0.8
46,702	-				+0.0
46,705	+				-0.8
46,771	+				-1.1
46,775	-				+0.2
46,803	+				-0.5
46,815	+				-1.2
46,816	-				+0.7
46,817	+				+0.2
46,817	+				+0.6
46,859	+				-0.8
46,859	+				+0.0
46,859	+				-0.5
46,880	+				+0.0
46,880	+				-0.1
46,881	-				-0.3
46,881	-				-1.6
46,888	+				-1.0
46,888	+				-0.2
46,912	+				+0.7
46,912	+				+1.4
46,913	-				-0.6
46,913	-				-0.6
46,971	+				+0.4
46,971	+				-0.6
46,980	+		HGI48_RS00180	0.16	-2.6
46,980	+		HGI48_RS00180	0.16	-0.3
47,003	+		HGI48_RS00180	0.19	+1.7
47,003	+		HGI48_RS00180	0.19	-0.6
47,003	+		HGI48_RS00180	0.19	-0.7
47,037	+		HGI48_RS00180	0.22	+0.4
47,038	-		HGI48_RS00180	0.22	+1.5
47,044	+		HGI48_RS00180	0.23	-2.4
47,055	+		HGI48_RS00180	0.24	-1.8
47,070	+		HGI48_RS00180	0.26	+0.8
47,098	+		HGI48_RS00180	0.29	-0.6
47,118	-		HGI48_RS00180	0.31	+0.3
47,118	-		HGI48_RS00180	0.31	-1.3
47,118	-		HGI48_RS00180	0.31	-1.1
47,118	-		HGI48_RS00180	0.31	+1.0
47,145	+				-0.6
47,146	-		HGI48_RS00180	0.34	-1.0
47,146	-		HGI48_RS00180	0.34	-0.8
47,180	+		HGI48_RS00180	0.37	+0.6
47,180	+				+1.0
47,180	+		HGI48_RS00180	0.37	-0.4
47,181	-		HGI48_RS00180	0.38	+0.0
47,185	-		HGI48_RS00180	0.38	-1.8
47,231	+		HGI48_RS00180	0.43	-0.5
47,232	-		HGI48_RS00180	0.43	-0.6
47,247	-		HGI48_RS00180	0.45	+0.6
47,247	-		HGI48_RS00180	0.45	-1.2
47,256	+		HGI48_RS00180	0.46	+1.0
47,256	+		HGI48_RS00180	0.46	+0.6
47,257	-		HGI48_RS00180	0.46	-2.0
47,257	-		HGI48_RS00180	0.46	-1.6
47,257	-		HGI48_RS00180	0.46	-0.2
47,262	+		HGI48_RS00180	0.46	+0.2
47,262	+		HGI48_RS00180	0.46	+1.0
47,263	-		HGI48_RS00180	0.46	-0.3
47,263	-		HGI48_RS00180	0.46	+1.2
47,320	+		HGI48_RS00180	0.52	-0.3
47,321	-				+1.0
47,371	+		HGI48_RS00180	0.58	-0.4
47,371	+		HGI48_RS00180	0.58	+0.0
47,380	+		HGI48_RS00180	0.59	-1.0
47,381	-		HGI48_RS00180	0.59	-0.1
47,450	+		HGI48_RS00180	0.66	+0.2
47,450	+		HGI48_RS00180	0.66	+0.2
47,451	-		HGI48_RS00180	0.66	-0.3
47,451	-		HGI48_RS00180	0.66	-1.1
47,466	-		HGI48_RS00180	0.68	+0.2
47,466	-		HGI48_RS00180	0.68	-0.7
47,470	-		HGI48_RS00180	0.68	-1.8
47,567	+		HGI48_RS00180	0.79	-0.2
47,568	-		HGI48_RS00180	0.79	+1.0
47,595	+		HGI48_RS00180	0.82	-1.0
47,595	+		HGI48_RS00180	0.82	+0.0
47,596	-		HGI48_RS00180	0.82	-1.0
47,597	+		HGI48_RS00180	0.82	-0.7
47,598	-		HGI48_RS00180	0.82	-0.9
47,598	-		HGI48_RS00180	0.82	-0.6
47,607	-		HGI48_RS00180	0.83	+1.1
47,607	-		HGI48_RS00180	0.83	-2.1
47,607	-		HGI48_RS00180	0.83	-0.6
47,617	+				-0.6
47,623	+		HGI48_RS00180	0.85	+0.4
47,624	-		HGI48_RS00180	0.85	+0.0
47,631	-		HGI48_RS00180	0.86	+0.7
47,646	+		HGI48_RS00180	0.87	-0.2
47,648	+				+0.0
47,649	-				+1.0
47,649	-		HGI48_RS00180	0.87	-1.6
47,685	+				-0.1
47,704	-				-0.6
47,723	-				+0.6
47,745	+				+0.3
47,768	+				-0.6
47,790	-				-0.1
47,903	-				-0.8
47,959	+				+0.0
47,960	-		HGI48_RS00185	0.12	-0.1
48,065	+				-0.6
48,090	+		HGI48_RS00185	0.20	-1.2
48,151	+		HGI48_RS00185	0.23	-0.3
48,314	+		HGI48_RS00185	0.33	+0.4
48,358	+		HGI48_RS00185	0.36	-0.2
48,398	+		HGI48_RS00185	0.38	-1.3
48,447	+				+1.8
48,448	-		HGI48_RS00185	0.41	+1.2
48,460	+		HGI48_RS00185	0.42	+0.4
48,532	+		HGI48_RS00185	0.46	-1.2
48,532	+		HGI48_RS00185	0.46	+0.5
48,533	-		HGI48_RS00185	0.46	+0.0
48,548	+		HGI48_RS00185	0.47	-1.1
48,729	-		HGI48_RS00185	0.58	-0.8