Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS00115

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
30,021	-		HGI48_RS00110	0.69	-0.5
30,023	+		HGI48_RS00110	0.69	+1.8
30,023	+		HGI48_RS00110	0.69	-1.0
30,023	+		HGI48_RS00110	0.69	+1.0
30,037	+		HGI48_RS00110	0.70	-0.3
30,038	-		HGI48_RS00110	0.70	+0.2
30,038	-		HGI48_RS00110	0.70	-1.7
30,065	+		HGI48_RS00110	0.72	-0.4
30,131	+				+2.0
30,132	-		HGI48_RS00110	0.78	-0.3
30,311	-				+0.4
30,379	-				+0.3
30,431	+				-1.0
30,431	+				+0.0
30,458	+				-1.1
30,649	+				+1.0
31,031	-				-1.2
31,048	-				+1.0
31,048	-				+0.3
31,170	+		HGI48_RS00115	0.17	-0.8
31,171	-		HGI48_RS00115	0.17	-0.3
31,242	+		HGI48_RS00115	0.25	-0.8
31,242	+		HGI48_RS00115	0.25	-0.7
31,270	+		HGI48_RS00115	0.28	-0.6
31,270	+		HGI48_RS00115	0.28	+0.6
31,271	-		HGI48_RS00115	0.28	-0.7
31,271	-		HGI48_RS00115	0.28	-0.1
31,271	-		HGI48_RS00115	0.28	-0.3
31,380	-		HGI48_RS00115	0.41	-0.6
31,399	-		HGI48_RS00115	0.43	-0.5
31,437	+		HGI48_RS00115	0.47	+0.4
31,438	-		HGI48_RS00115	0.47	+1.6
31,496	+		HGI48_RS00115	0.54	-0.7
31,496	+				+2.0
31,497	-		HGI48_RS00115	0.54	+0.4
31,510	+		HGI48_RS00115	0.55	+0.0
31,510	+		HGI48_RS00115	0.55	-0.4
31,511	-		HGI48_RS00115	0.55	-1.0
31,511	-		HGI48_RS00115	0.55	-0.5
31,511	-		HGI48_RS00115	0.55	-0.6
31,511	-		HGI48_RS00115	0.55	+0.0
31,511	-		HGI48_RS00115	0.55	+0.0
31,511	-		HGI48_RS00115	0.55	-1.9
31,533	+		HGI48_RS00115	0.58	-0.1
31,534	-				+0.4
31,534	-		HGI48_RS00115	0.58	+0.0
31,616	+		HGI48_RS00115	0.67	-1.3
31,617	-		HGI48_RS00115	0.67	+1.0
31,617	-		HGI48_RS00115	0.67	+0.0
31,617	-		HGI48_RS00115	0.67	-0.2
31,617	-		HGI48_RS00115	0.67	+0.8
31,653	+				+1.4
31,653	+		HGI48_RS00115	0.71	+0.4
31,654	-		HGI48_RS00115	0.71	-0.8
31,654	-		HGI48_RS00115	0.71	-1.0
31,710	+		HGI48_RS00115	0.77	-1.0
31,722	+				-0.6
31,722	+		HGI48_RS00115	0.79	+0.4
31,723	-		HGI48_RS00115	0.79	-0.4
31,795	-		HGI48_RS00115	0.87	-0.2
31,803	+		HGI48_RS00115	0.88	-0.3
31,846	+				-0.4
31,846	+				-0.8
31,847	-				-0.4
31,878	+				+0.7
31,878	+				-2.4
31,887	+				-1.0
31,927	+				-1.0
31,947	+				-0.3
31,949	+				-1.3
31,949	+				-0.4
31,949	+				-1.2
31,949	+				+1.2
31,949	+				-1.0
31,950	-				-1.6
31,950	-				-0.8
31,950	-				+0.4
31,950	-				-1.2
31,950	-				+0.2
31,950	-				-0.6
31,950	-				+1.5
31,950	-				-0.0
31,953	+				-0.4
31,953	+				-0.6
31,953	+				-0.8
31,953	+				-1.3
31,953	+				+0.5
31,954	-				+0.0
31,954	-				-0.6
31,954	-				-1.6
31,954	-				-0.8
31,954	-				-0.2
31,954	-				+0.0
32,075	+				-0.4
32,105	+				+1.4
32,105	+				-1.7
32,122	-				+0.2
32,133	+				+0.3
32,133	+				-0.2
32,133	+				-0.3
32,133	+				-0.4
32,134	-				-0.6
32,134	-				+0.0
32,134	-				-0.8
32,134	-				+0.4
32,134	-				-2.0
32,134	-				+0.2
32,134	-				-1.0
32,134	-				+0.0
32,134	-				+0.0
32,134	-				-0.3
32,160	+				-1.0
32,257	+				-1.1
32,257	+				-0.6
32,258	-				-1.1
32,274	+				-0.4
32,274	+				-0.6
32,274	+				-0.7
32,274	+				-0.3
32,275	-				+1.2
32,275	-				+0.0
32,286	+				+0.6
32,286	+				+0.3
32,332	+				-1.6
32,332	+				+0.4
32,333	-				+2.0
32,333	-				-0.3
32,333	-				-2.0
32,444	-		HGI48_RS00120	0.17	+0.5
32,444	-		HGI48_RS00120	0.17	-1.1
32,527	+		HGI48_RS00120	0.35	-1.6
32,527	+		HGI48_RS00120	0.35	-1.0
32,527	+		HGI48_RS00120	0.35	+0.0
32,527	+				+2.0
32,527	+				+0.4
32,527	+		HGI48_RS00120	0.35	+0.3
32,527	+		HGI48_RS00120	0.35	-1.3
32,528	-		HGI48_RS00120	0.35	-0.6
32,528	-		HGI48_RS00120	0.35	+1.5
32,528	-		HGI48_RS00120	0.35	+0.0
32,528	-		HGI48_RS00120	0.35	+0.0
32,528	-		HGI48_RS00120	0.35	+0.2
32,528	-		HGI48_RS00120	0.35	-1.7
32,528	-				+0.0
32,587	+				+1.4
32,600	+		HGI48_RS00120	0.50	-0.6
32,600	+		HGI48_RS00120	0.50	-1.6
32,600	+		HGI48_RS00120	0.50	-0.8
32,600	+				+1.0
32,600	+		HGI48_RS00120	0.50	+0.2
32,600	+		HGI48_RS00120	0.50	+0.4
32,600	+		HGI48_RS00120	0.50	-0.2
32,601	-		HGI48_RS00120	0.50	-1.5
32,601	-		HGI48_RS00120	0.50	+0.6
32,606	+		HGI48_RS00120	0.51	+0.4
32,606	+		HGI48_RS00120	0.51	-0.3
32,607	-		HGI48_RS00120	0.52	+1.0
32,607	-				+0.0
32,607	-				+1.0
32,710	-		HGI48_RS00120	0.74	-1.3
32,710	-				+0.4
32,794	+				+1.8
32,795	-				-0.1
32,795	-				-2.0
32,795	-				-0.3
32,852	+				+0.5
32,853	-				-0.1
32,890	+				-1.3
32,890	+				+0.4
32,890	+				+0.5
32,890	+				+0.3
32,891	-				-0.5
32,891	-				+0.0
32,891	-				-0.6
32,891	-				+1.0
32,891	-				-0.1
32,896	+				-0.1