Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS21690

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,838,979	-		HGI48_RS21685	0.44	-0.3
4,838,985	+		HGI48_RS21685	0.44	-0.5
4,838,986	-		HGI48_RS21685	0.44	-1.1
4,839,001	+				+0.3
4,839,021	+		HGI48_RS21685	0.46	+0.7
4,839,022	-		HGI48_RS21685	0.46	+0.6
4,839,022	-		HGI48_RS21685	0.46	-0.1
4,839,024	+		HGI48_RS21685	0.46	-1.1
4,839,024	+		HGI48_RS21685	0.46	-1.9
4,839,024	+		HGI48_RS21685	0.46	-1.7
4,839,025	-		HGI48_RS21685	0.46	+0.6
4,839,025	-		HGI48_RS21685	0.46	-0.0
4,839,053	+		HGI48_RS21685	0.48	+0.0
4,839,053	+		HGI48_RS21685	0.48	+1.4
4,839,053	+		HGI48_RS21685	0.48	-0.3
4,839,053	+		HGI48_RS21685	0.48	-1.2
4,839,053	+		HGI48_RS21685	0.48	+1.4
4,839,054	-		HGI48_RS21685	0.48	+0.2
4,839,054	-		HGI48_RS21685	0.48	-1.0
4,839,054	-		HGI48_RS21685	0.48	+0.1
4,839,054	-		HGI48_RS21685	0.48	+0.9
4,839,105	+		HGI48_RS21685	0.51	-0.0
4,839,105	+		HGI48_RS21685	0.51	-1.7
4,839,106	-				-0.7
4,839,106	-		HGI48_RS21685	0.51	+0.3
4,839,106	-		HGI48_RS21685	0.51	-0.7
4,839,106	-		HGI48_RS21685	0.51	+1.4
4,839,109	-		HGI48_RS21685	0.51	-0.1
4,839,161	+		HGI48_RS21685	0.54	-0.5
4,839,161	+		HGI48_RS21685	0.54	+1.2
4,839,161	+		HGI48_RS21685	0.54	+0.9
4,839,161	+		HGI48_RS21685	0.54	+1.2
4,839,161	+		HGI48_RS21685	0.54	+0.1
4,839,162	-		HGI48_RS21685	0.54	+1.1
4,839,167	-		HGI48_RS21685	0.54	-1.7
4,839,335	+		HGI48_RS21685	0.64	+0.5
4,839,335	+		HGI48_RS21685	0.64	+0.6
4,839,336	-		HGI48_RS21685	0.64	+0.6
4,839,336	-		HGI48_RS21685	0.64	-0.4
4,839,340	+		HGI48_RS21685	0.64	+1.3
4,839,341	-		HGI48_RS21685	0.64	-0.9
4,839,341	-		HGI48_RS21685	0.64	-0.6
4,839,414	-		HGI48_RS21685	0.68	-0.1
4,839,414	-		HGI48_RS21685	0.68	+0.1
4,839,441	-		HGI48_RS21685	0.70	+0.4
4,839,507	+		HGI48_RS21685	0.74	-1.1
4,839,507	+		HGI48_RS21685	0.74	-0.9
4,839,507	+		HGI48_RS21685	0.74	-0.9
4,839,507	+		HGI48_RS21685	0.74	+0.4
4,839,507	+		HGI48_RS21685	0.74	-1.5
4,839,507	+		HGI48_RS21685	0.74	+0.3
4,839,507	+		HGI48_RS21685	0.74	-0.7
4,839,508	-		HGI48_RS21685	0.74	+0.6
4,839,508	-		HGI48_RS21685	0.74	+0.7
4,839,508	-		HGI48_RS21685	0.74	+0.9
4,839,508	-		HGI48_RS21685	0.74	+0.6
4,839,508	-		HGI48_RS21685	0.74	-2.1
4,839,553	+		HGI48_RS21685	0.76	-0.1
4,839,553	+		HGI48_RS21685	0.76	-0.6
4,839,554	-				+0.9
4,839,621	-		HGI48_RS21685	0.80	+1.1
4,839,621	-		HGI48_RS21685	0.80	-0.6
4,839,621	-		HGI48_RS21685	0.80	-0.4
4,839,684	+		HGI48_RS21685	0.84	+1.3
4,839,684	+		HGI48_RS21685	0.84	+0.0
4,839,685	-		HGI48_RS21685	0.84	-0.9
4,839,731	+		HGI48_RS21685	0.86	-1.1
4,839,731	+		HGI48_RS21685	0.86	+0.1
4,839,731	+		HGI48_RS21685	0.86	+0.4
4,839,732	-		HGI48_RS21685	0.86	+1.1
4,839,732	-		HGI48_RS21685	0.86	+0.9
4,839,817	+				+1.9
4,839,817	+				-1.3
4,839,818	-				-0.4
4,839,909	+				-1.1
4,839,965	+				-0.0
4,839,966	-				-0.3
4,840,032	+				-0.6
4,840,032	+				-0.5
4,840,032	+				-2.3
4,840,033	-				-0.2
4,840,033	-				+0.3
4,840,033	-				-1.4
4,840,036	+				+0.7
4,840,036	+				-1.9
4,840,355	+		HGI48_RS21690	0.25	-0.1
4,840,355	+		HGI48_RS21690	0.25	-1.9
4,840,555	-		HGI48_RS21690	0.39	-2.3
4,840,624	+		HGI48_RS21690	0.43	+0.7
4,840,626	+		HGI48_RS21690	0.43	-0.1
4,840,626	+		HGI48_RS21690	0.43	-1.6
4,840,628	+				-0.1
4,840,628	+		HGI48_RS21690	0.43	+0.5
4,840,628	+		HGI48_RS21690	0.43	-1.5
4,840,628	+		HGI48_RS21690	0.43	-0.7
4,840,628	+		HGI48_RS21690	0.43	-1.1
4,840,628	+		HGI48_RS21690	0.43	-2.6
4,840,628	+		HGI48_RS21690	0.43	-0.4
4,840,655	+		HGI48_RS21690	0.45	-1.1
4,840,655	+		HGI48_RS21690	0.45	-0.9
4,840,913	+		HGI48_RS21690	0.62	+0.2
4,840,941	+		HGI48_RS21690	0.64	-1.7
4,840,941	+		HGI48_RS21690	0.64	-0.4
4,840,945	-		HGI48_RS21690	0.64	+0.1
4,840,950	+		HGI48_RS21690	0.65	+0.1
4,841,249	-		HGI48_RS21690	0.85	-0.1
4,841,252	+		HGI48_RS21690	0.85	+0.2
4,841,264	+		HGI48_RS21690	0.86	-1.7
4,841,302	+		HGI48_RS21690	0.88	-1.0
4,841,302	+		HGI48_RS21690	0.88	+1.5
4,841,336	+				+1.1
4,841,397	+				-2.5
4,841,445	+				+0.8
4,841,501	-				+0.3
4,841,622	+				-2.5
4,841,622	+				-0.1
4,841,685	+				-0.1
4,841,685	+				-0.0
4,841,832	+		HGI48_RS21695	0.15	+0.7
4,842,028	+		HGI48_RS21695	0.27	-1.1
4,842,035	+		HGI48_RS21695	0.27	+0.0
4,842,039	+		HGI48_RS21695	0.27	+0.2
4,842,126	-		HGI48_RS21695	0.32	+0.2
4,842,184	+		HGI48_RS21695	0.36	+0.1
4,842,184	+		HGI48_RS21695	0.36	+0.2
4,842,201	+		HGI48_RS21695	0.37	+2.2
4,842,202	-		HGI48_RS21695	0.37	+0.1
4,842,204	+		HGI48_RS21695	0.37	-1.9
4,842,204	+		HGI48_RS21695	0.37	+0.1
4,842,298	+		HGI48_RS21695	0.42	+0.6
4,842,299	-		HGI48_RS21695	0.42	-0.5
4,842,316	+		HGI48_RS21695	0.43	-0.6
4,842,424	+		HGI48_RS21695	0.50	-0.1