Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS20215

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,513,480	+		HGI48_RS20210	0.34	-1.5
4,513,564	+		HGI48_RS20210	0.42	-0.4
4,513,564	+		HGI48_RS20210	0.42	-1.0
4,513,564	+		HGI48_RS20210	0.42	+0.2
4,513,564	+		HGI48_RS20210	0.42	-0.7
4,513,564	+		HGI48_RS20210	0.42	-1.2
4,513,564	+		HGI48_RS20210	0.42	+0.3
4,513,564	+				-0.8
4,513,565	-		HGI48_RS20210	0.42	-0.2
4,513,565	-		HGI48_RS20210	0.42	-1.2
4,513,565	-		HGI48_RS20210	0.42	+0.8
4,513,566	+		HGI48_RS20210	0.42	-0.0
4,513,665	+		HGI48_RS20210	0.51	-2.2
4,513,666	-		HGI48_RS20210	0.52	+1.2
4,513,666	-		HGI48_RS20210	0.52	-0.2
4,513,666	-		HGI48_RS20210	0.52	+0.3
4,513,666	-		HGI48_RS20210	0.52	+1.6
4,513,742	-		HGI48_RS20210	0.59	-1.3
4,513,785	+		HGI48_RS20210	0.63	+0.1
4,513,786	-		HGI48_RS20210	0.63	-0.8
4,513,786	-		HGI48_RS20210	0.63	+0.4
4,513,828	+		HGI48_RS20210	0.67	-0.3
4,513,829	-		HGI48_RS20210	0.67	+0.5
4,513,829	-		HGI48_RS20210	0.67	+0.2
4,513,829	-		HGI48_RS20210	0.67	+0.8
4,513,829	-		HGI48_RS20210	0.67	-1.4
4,513,830	+		HGI48_RS20210	0.67	-1.4
4,513,830	+		HGI48_RS20210	0.67	-1.3
4,513,830	+		HGI48_RS20210	0.67	-0.5
4,513,831	-		HGI48_RS20210	0.67	-1.2
4,513,844	+		HGI48_RS20210	0.68	-1.6
4,513,844	+		HGI48_RS20210	0.68	-0.8
4,513,844	+		HGI48_RS20210	0.68	-1.1
4,513,844	+		HGI48_RS20210	0.68	-0.5
4,513,845	-		HGI48_RS20210	0.68	+0.7
4,513,845	-		HGI48_RS20210	0.68	+0.1
4,513,974	+				+0.8
4,513,975	-		HGI48_RS20210	0.80	-0.5
4,514,034	+		HGI48_RS20210	0.86	-0.2
4,514,034	+				+0.2
4,514,034	+		HGI48_RS20210	0.86	+0.1
4,514,035	-		HGI48_RS20210	0.86	+0.8
4,514,045	-		HGI48_RS20210	0.87	+0.1
4,514,171	+				+0.8
4,514,172	-				-2.2
4,514,172	-				-1.8
4,514,172	-				+0.3
4,514,203	+				+0.8
4,514,204	-				-0.5
4,514,219	+				-1.2
4,514,220	-				+0.0
4,514,248	-				+1.2
4,514,345	+				+1.1
4,514,346	-				+0.2
4,514,346	-				-1.6
4,514,411	+				-0.3
4,514,412	-				-1.3
4,515,707	-				+1.1
4,515,722	-				-1.5
4,515,800	-				-1.0
4,515,845	-				-1.5
4,515,932	-				+0.3
4,515,939	-				-3.2
4,515,978	-				+0.2
4,515,982	-				-0.2
4,516,006	-				-2.2
4,516,006	-				+0.8
4,516,192	-		HGI48_RS20220	0.31	+0.4
4,516,205	+				+0.8
4,516,218	+		HGI48_RS20220	0.39	-1.5
4,516,239	+		HGI48_RS20220	0.46	-1.3
4,516,239	+		HGI48_RS20220	0.46	-0.3
4,516,348	+		HGI48_RS20220	0.79	-1.3
4,516,349	-		HGI48_RS20220	0.79	-1.8
4,516,349	-		HGI48_RS20220	0.79	-1.2
4,516,402	-				+0.2
4,516,435	-				-2.2
4,516,435	-				+0.7
4,516,435	-				-0.8
4,516,435	-				+0.6
4,516,454	-				-1.5
4,516,454	-				-0.8
4,516,468	-				-0.8
4,516,482	-				-0.8
4,516,494	-				+1.4
4,516,511	+				-2.2
4,516,511	+				-0.8
4,516,512	-				-1.0
4,516,523	-				+0.7
4,516,523	-				+0.6
4,516,523	-				-0.3
4,516,527	+				-0.0
4,516,536	-				+1.2