Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS20200

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,509,908	-		HGI48_RS20195	0.35	-0.4
4,509,959	+		HGI48_RS20195	0.39	+1.1
4,510,064	+		HGI48_RS20195	0.47	-1.0
4,510,064	+		HGI48_RS20195	0.47	+0.1
4,510,064	+		HGI48_RS20195	0.47	-0.2
4,510,064	+		HGI48_RS20195	0.47	+0.2
4,510,065	-				+1.2
4,510,065	-		HGI48_RS20195	0.47	-1.2
4,510,065	-		HGI48_RS20195	0.47	+0.5
4,510,065	-		HGI48_RS20195	0.47	-1.2
4,510,126	+		HGI48_RS20195	0.52	+0.8
4,510,126	+		HGI48_RS20195	0.52	+0.5
4,510,126	+		HGI48_RS20195	0.52	-1.0
4,510,126	+		HGI48_RS20195	0.52	-0.8
4,510,126	+		HGI48_RS20195	0.52	+0.1
4,510,126	+		HGI48_RS20195	0.52	-0.2
4,510,127	-		HGI48_RS20195	0.52	-2.3
4,510,127	-		HGI48_RS20195	0.52	-0.3
4,510,447	+		HGI48_RS20195	0.78	+1.6
4,510,448	-		HGI48_RS20195	0.78	+1.1
4,510,448	-		HGI48_RS20195	0.78	+0.3
4,510,470	-		HGI48_RS20195	0.79	-0.2
4,510,490	-		HGI48_RS20195	0.81	+0.4
4,510,529	+		HGI48_RS20195	0.84	-0.1
4,510,530	-		HGI48_RS20195	0.84	+0.2
4,510,530	-				+1.8
4,510,533	+				+0.2
4,510,533	+		HGI48_RS20195	0.84	-0.3
4,510,533	+		HGI48_RS20195	0.84	-0.2
4,510,534	-		HGI48_RS20195	0.85	-0.3
4,510,585	+		HGI48_RS20195	0.89	+1.1
4,510,585	+		HGI48_RS20195	0.89	-1.3
4,510,586	-		HGI48_RS20195	0.89	-1.8
4,510,592	-		HGI48_RS20195	0.89	+0.0
4,510,692	+				-0.8
4,510,692	+				-1.1
4,510,693	-				+0.8
4,510,813	-				-0.8
4,510,820	+				+0.5
4,510,821	-				+0.0
4,511,039	+		HGI48_RS20200	0.26	+0.7
4,511,039	+		HGI48_RS20200	0.26	+0.2
4,511,054	+		HGI48_RS20200	0.28	+1.4
4,511,054	+		HGI48_RS20200	0.28	-0.0
4,511,054	+		HGI48_RS20200	0.28	-2.2
4,511,055	-				-0.8
4,511,055	-				+0.2
4,511,083	-		HGI48_RS20200	0.30	-1.0
4,511,100	+				-0.8
4,511,100	+		HGI48_RS20200	0.32	-0.2
4,511,101	-		HGI48_RS20200	0.32	+0.2
4,511,119	+		HGI48_RS20200	0.33	+0.0
4,511,119	+		HGI48_RS20200	0.33	-1.8
4,511,138	-		HGI48_RS20200	0.35	-0.4
4,511,138	-		HGI48_RS20200	0.35	+0.5
4,511,341	+		HGI48_RS20200	0.53	-1.4
4,511,342	-		HGI48_RS20200	0.53	+0.1
4,511,376	+		HGI48_RS20200	0.56	-1.8
4,511,377	-		HGI48_RS20200	0.56	+0.7
4,511,441	+		HGI48_RS20200	0.62	-0.8
4,511,441	+		HGI48_RS20200	0.62	+0.0
4,511,441	+		HGI48_RS20200	0.62	-0.3
4,511,441	+		HGI48_RS20200	0.62	-1.3
4,511,442	-		HGI48_RS20200	0.62	-0.9
4,511,541	+		HGI48_RS20200	0.71	+0.6
4,511,542	-		HGI48_RS20200	0.71	-0.2
4,511,549	+		HGI48_RS20200	0.71	-1.5
4,511,549	+		HGI48_RS20200	0.71	-0.0
4,511,549	+		HGI48_RS20200	0.71	-0.2
4,511,549	+		HGI48_RS20200	0.71	+2.3
4,511,549	+				+2.8
4,511,550	-		HGI48_RS20200	0.72	-0.4
4,511,550	-		HGI48_RS20200	0.72	+0.5
4,511,550	-		HGI48_RS20200	0.72	-1.5
4,511,691	+		HGI48_RS20200	0.84	-0.3
4,511,716	+		HGI48_RS20200	0.86	+1.2
4,511,717	-				+0.2
4,511,984	-				-0.8
4,512,119	-		HGI48_RS20205	0.11	+0.0
4,512,127	-		HGI48_RS20205	0.12	-0.3
4,512,132	+		HGI48_RS20205	0.13	+0.5
4,512,202	-		HGI48_RS20205	0.19	+0.4
4,512,272	+		HGI48_RS20205	0.26	+0.4
4,512,323	+		HGI48_RS20205	0.31	+0.2
4,512,323	+		HGI48_RS20205	0.31	+1.2
4,512,323	+		HGI48_RS20205	0.31	+0.3
4,512,323	+		HGI48_RS20205	0.31	-0.8
4,512,324	-				-0.2
4,512,324	-		HGI48_RS20205	0.31	+0.8
4,512,346	+		HGI48_RS20205	0.33	-0.0
4,512,347	-		HGI48_RS20205	0.33	-1.2
4,512,371	+		HGI48_RS20205	0.36	-0.5
4,512,510	+				-0.8
4,512,510	+		HGI48_RS20205	0.49	-1.2
4,512,510	+				-0.8
4,512,510	+		HGI48_RS20205	0.49	+0.5
4,512,510	+		HGI48_RS20205	0.49	-0.8
4,512,511	-		HGI48_RS20205	0.49	+1.4
4,512,511	-		HGI48_RS20205	0.49	+0.2
4,512,511	-		HGI48_RS20205	0.49	-1.1
4,512,511	-		HGI48_RS20205	0.49	-1.2
4,512,598	+		HGI48_RS20205	0.58	-0.2
4,512,599	-		HGI48_RS20205	0.58	-0.6
4,512,608	-		HGI48_RS20205	0.59	-1.0
4,512,675	+		HGI48_RS20205	0.65	+1.2
4,512,676	-		HGI48_RS20205	0.65	-0.9
4,512,676	-		HGI48_RS20205	0.65	-0.1
4,512,676	-		HGI48_RS20205	0.65	-1.5
4,512,741	+				+1.4
4,512,742	-		HGI48_RS20205	0.71	-0.3
4,512,742	-		HGI48_RS20205	0.71	-1.3
4,512,742	-		HGI48_RS20205	0.71	-2.2