Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS19815

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,426,924	+		HGI48_RS19805	0.86	-1.0
4,426,925	-		HGI48_RS19805	0.87	+0.5
4,426,978	+				+1.4
4,426,978	+				+0.0
4,426,978	+				+0.8
4,426,978	+				+0.3
4,426,978	+				-1.6
4,426,978	+				-0.2
4,426,978	+				+0.7
4,426,978	+				-1.0
4,426,978	+				-0.3
4,426,978	+				-1.2
4,426,979	-				-0.1
4,426,979	-				+0.4
4,426,979	-				+0.4
4,426,979	-				-0.3
4,426,979	-				+0.4
4,426,980	+				+0.3
4,426,981	-				-0.2
4,426,981	-				+0.8
4,426,981	-				-1.5
4,426,981	-				-2.0
4,427,042	-				+0.7
4,427,068	+				-0.6
4,427,068	+				+0.4
4,427,069	-				-0.2
4,427,069	-				-1.2
4,427,092	-				+0.5
4,427,092	-				+0.6
4,427,114	-				-0.6
4,427,133	+				+0.2
4,427,134	-				-1.8
4,427,134	-				+1.8
4,427,200	+				-1.5
4,427,211	+				+0.5
4,427,211	+				-1.8
4,427,212	-				-0.2
4,427,291	+		HGI48_RS19810	0.20	-0.4
4,427,291	+		HGI48_RS19810	0.20	-2.0
4,427,291	+		HGI48_RS19810	0.20	-0.3
4,427,291	+		HGI48_RS19810	0.20	-0.3
4,427,292	-		HGI48_RS19810	0.20	-1.5
4,427,294	-		HGI48_RS19810	0.21	+0.5
4,427,313	+		HGI48_RS19810	0.27	-0.2
4,427,314	-		HGI48_RS19810	0.27	-0.4
4,427,317	+		HGI48_RS19810	0.28	+1.8
4,427,317	+		HGI48_RS19810	0.28	-0.2
4,427,317	+		HGI48_RS19810	0.28	-0.3
4,427,318	-		HGI48_RS19810	0.28	+0.8
4,427,318	-		HGI48_RS19810	0.28	+1.3
4,427,321	+		HGI48_RS19810	0.29	+0.3
4,427,321	+		HGI48_RS19810	0.29	-1.5
4,427,321	+		HGI48_RS19810	0.29	-0.2
4,427,354	+		HGI48_RS19810	0.40	+0.4
4,427,476	-		HGI48_RS19810	0.78	+0.6
4,427,511	-		HGI48_RS19810	0.88	-0.3
4,427,511	-		HGI48_RS19810	0.88	-0.6
4,427,560	-				+0.4
4,427,570	-				-0.6
4,427,656	+				+0.2
4,427,658	+				+0.5
4,427,659	-				-1.8
4,427,751	+				+1.2
4,427,761	+				-1.0
4,428,194	+		HGI48_RS19815	0.21	-0.4
4,428,756	+		HGI48_RS19815	0.59	+0.2
4,428,758	+		HGI48_RS19815	0.59	-1.4
4,428,810	-				+1.8
4,428,987	-				+0.8
4,429,344	-				-1.0
4,429,374	+				-0.5
4,429,374	+				-0.8
4,429,375	-				+0.7
4,429,381	+				-1.8
4,429,412	-				-0.2
4,429,429	-				-0.2
4,429,429	-				+0.1
4,429,481	-		HGI48_RS19820	0.12	+0.8
4,429,511	+		HGI48_RS19820	0.24	-0.3
4,429,511	+		HGI48_RS19820	0.24	-1.5
4,429,555	+		HGI48_RS19820	0.40	-0.1
4,429,555	+		HGI48_RS19820	0.40	+0.8
4,429,557	+		HGI48_RS19820	0.41	+1.1
4,429,567	+		HGI48_RS19820	0.45	-2.2
4,429,568	-		HGI48_RS19820	0.45	-0.2
4,429,618	+		HGI48_RS19820	0.64	-2.0
4,429,619	-		HGI48_RS19820	0.64	-1.2
4,429,621	+		HGI48_RS19820	0.65	-1.2
4,429,695	-				-0.2
4,429,789	+		HGI48_RS19825	0.19	+0.2
4,429,796	-		HGI48_RS19825	0.21	-0.2
4,429,800	-		HGI48_RS19825	0.22	+0.1
4,429,800	-		HGI48_RS19825	0.22	+0.8
4,429,899	+		HGI48_RS19825	0.49	+0.2
4,429,910	-		HGI48_RS19825	0.52	-0.2
4,429,992	-		HGI48_RS19825	0.74	+0.2
4,430,075	+				-0.7
4,430,088	-				+0.2
4,430,254	-		HGI48_RS19830	0.15	-0.2
4,430,285	+		HGI48_RS19830	0.17	-0.8
4,430,341	-		HGI48_RS19830	0.22	-0.1
4,430,341	-		HGI48_RS19830	0.22	-0.2
4,430,371	+		HGI48_RS19830	0.25	+0.0
4,430,372	-		HGI48_RS19830	0.25	+0.0