Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS18705

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,194,795	+		HGI48_RS18700	0.74	-0.1
4,194,796	-		HGI48_RS18700	0.74	+1.2
4,194,796	-		HGI48_RS18700	0.74	-0.5
4,194,796	-		HGI48_RS18700	0.74	-0.4
4,194,796	-		HGI48_RS18700	0.74	-0.1
4,194,798	-		HGI48_RS18700	0.74	-1.6
4,194,798	-		HGI48_RS18700	0.74	-1.9
4,194,798	-		HGI48_RS18700	0.74	-1.0
4,194,806	+		HGI48_RS18700	0.75	-1.2
4,194,807	-		HGI48_RS18700	0.75	-0.8
4,194,814	+		HGI48_RS18700	0.76	+0.7
4,194,814	+		HGI48_RS18700	0.76	+0.5
4,194,814	+		HGI48_RS18700	0.76	-0.7
4,194,815	-				+2.1
4,194,815	-		HGI48_RS18700	0.76	+1.2
4,194,815	-		HGI48_RS18700	0.76	-0.3
4,195,046	+				-1.7
4,195,053	+				-1.4
4,195,053	+				+0.0
4,195,054	-				-0.4
4,195,055	+				+0.5
4,195,055	+				-0.0
4,195,055	+				-0.2
4,195,055	+				-1.8
4,195,055	+				-0.2
4,195,055	+				-0.6
4,195,055	+				-2.1
4,195,056	-				-0.8
4,195,121	-				-1.2
4,195,128	+				-1.2
4,195,136	+				-1.6
4,195,140	-				-0.4
4,195,140	-				-1.0
4,195,200	-				-1.2
4,195,212	+				-0.7
4,195,212	+				+0.4
4,195,213	-				+2.0
4,195,213	-				-0.3
4,195,213	-				+0.4
4,195,213	-				+0.4
4,195,214	+				+0.3
4,195,215	-				+0.1
4,195,215	-				-0.3
4,195,215	-				-2.2
4,195,216	+				+0.8
4,195,216	+				+0.3
4,195,216	+				-0.4
4,195,217	-				+0.2
4,195,217	-				-0.2
4,195,217	-				-0.2
4,195,217	-				-0.4
4,195,217	-				-0.2
4,195,217	-				-0.5
4,195,229	+				-0.3
4,195,230	-				-0.6
4,195,356	+				-0.6
4,195,356	+				-1.6
4,195,356	+				+0.8
4,195,357	-				-2.1
4,195,357	-				-0.8
4,195,380	-				+1.2
4,195,421	+				-0.2
4,195,422	-				-1.2
4,195,422	-				+0.5
4,195,484	+				-1.0
4,195,491	+				-0.2
4,195,492	-				+1.2
4,195,741	+				-0.2
4,195,741	+		HGI48_RS18705	0.11	+1.3
4,195,741	+		HGI48_RS18705	0.11	+0.3
4,195,742	-		HGI48_RS18705	0.11	-0.8
4,195,742	-				+3.6
4,195,742	-				+0.8
4,195,859	-		HGI48_RS18705	0.20	+0.2
4,195,859	-		HGI48_RS18705	0.20	+0.1
4,195,859	-		HGI48_RS18705	0.20	+0.3
4,195,859	-		HGI48_RS18705	0.20	+0.8
4,195,859	-		HGI48_RS18705	0.20	-0.3
4,196,034	-		HGI48_RS18705	0.34	-0.0
4,196,121	+		HGI48_RS18705	0.40	+0.8
4,196,178	+		HGI48_RS18705	0.45	-0.6
4,196,199	+		HGI48_RS18705	0.46	-0.2
4,196,200	-		HGI48_RS18705	0.46	+1.4
4,196,302	+				+0.2
4,196,314	-		HGI48_RS18705	0.55	-1.2
4,196,359	-		HGI48_RS18705	0.58	+1.0
4,196,416	+		HGI48_RS18705	0.63	-2.2
4,196,416	+		HGI48_RS18705	0.63	+0.5
4,196,461	+		HGI48_RS18705	0.66	-1.4
4,196,462	-		HGI48_RS18705	0.66	+0.6
4,196,462	-		HGI48_RS18705	0.66	-0.6
4,196,485	+		HGI48_RS18705	0.68	-1.1
4,196,485	+		HGI48_RS18705	0.68	-3.2
4,196,486	-		HGI48_RS18705	0.68	-0.1
4,196,486	-		HGI48_RS18705	0.68	+0.8
4,196,574	+		HGI48_RS18705	0.75	+1.0
4,196,863	+				-1.9
4,197,037	+		HGI48_RS18710	0.12	-1.1
4,197,119	+		HGI48_RS18710	0.21	+0.4
4,197,120	-		HGI48_RS18710	0.21	+0.8
4,197,288	+		HGI48_RS18710	0.40	+1.2
4,197,354	+		HGI48_RS18710	0.47	-0.1
4,197,365	+		HGI48_RS18710	0.48	-1.6
4,197,379	-				+1.3
4,197,379	-		HGI48_RS18710	0.49	+0.1
4,197,427	+				+1.2
4,197,534	+		HGI48_RS18710	0.66	+1.0
4,197,534	+		HGI48_RS18710	0.66	+0.0
4,197,535	-		HGI48_RS18710	0.66	-1.2
4,197,535	-		HGI48_RS18710	0.66	+0.8
4,197,535	-		HGI48_RS18710	0.66	-1.2
4,197,535	-		HGI48_RS18710	0.66	+0.8
4,197,818	+				+0.2
4,197,883	+				-0.1
4,197,883	+				+2.0
4,197,883	+				+1.8
4,197,884	-				+0.1
4,197,884	-				+0.3
4,197,884	-				+0.5
4,197,884	-				-1.2
4,197,884	-				-1.2
4,197,884	-				+0.4
4,197,884	-				+1.1
4,197,888	+				+1.1
4,197,888	+				-2.8
4,197,889	-				+0.8