Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS17765

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,984,028	-				+0.1
3,984,079	+		HGI48_RS17760	0.45	-1.6
3,984,079	+		HGI48_RS17760	0.45	-0.9
3,984,079	+		HGI48_RS17760	0.45	+0.0
3,984,079	+		HGI48_RS17760	0.45	-0.3
3,984,079	+		HGI48_RS17760	0.45	+0.4
3,984,080	-		HGI48_RS17760	0.46	-1.3
3,984,080	-		HGI48_RS17760	0.46	-0.3
3,984,157	+		HGI48_RS17760	0.54	-0.4
3,984,157	+		HGI48_RS17760	0.54	+1.2
3,984,158	-		HGI48_RS17760	0.54	-0.8
3,984,158	-		HGI48_RS17760	0.54	-0.3
3,984,158	-		HGI48_RS17760	0.54	-0.7
3,984,158	-				-0.9
3,984,170	+		HGI48_RS17760	0.56	-0.3
3,984,170	+		HGI48_RS17760	0.56	-2.1
3,984,171	-		HGI48_RS17760	0.56	-0.3
3,984,171	-		HGI48_RS17760	0.56	+1.3
3,984,171	-		HGI48_RS17760	0.56	-2.6
3,984,171	-		HGI48_RS17760	0.56	+0.4
3,984,171	-				+1.1
3,984,382	+		HGI48_RS17760	0.80	+0.1
3,984,382	+				-0.3
3,984,382	+		HGI48_RS17760	0.80	-0.3
3,984,382	+		HGI48_RS17760	0.80	+0.5
3,984,382	+		HGI48_RS17760	0.80	-0.3
3,984,383	-		HGI48_RS17760	0.80	+0.3
3,984,383	-		HGI48_RS17760	0.80	+0.9
3,984,505	+				+0.7
3,984,505	+				+2.1
3,984,505	+				-2.1
3,984,505	+				+0.5
3,984,505	+				+0.4
3,984,506	-				-0.3
3,984,556	+				-0.5
3,984,556	+				+1.0
3,984,556	+				-0.8
3,984,557	-				-2.1
3,984,557	-				-0.3
3,984,557	-				+0.4
3,984,557	-				-0.9
3,984,624	+				-2.3
3,984,641	+				-0.0
3,984,641	+				-0.5
3,984,641	+				-0.0
3,984,641	+				-0.5
3,984,641	+				-1.4
3,984,641	+				+0.7
3,984,642	-				+1.4
3,984,642	-				-0.1
3,984,642	-				+0.5
3,984,642	-				-0.1
3,984,643	+				-0.1
3,984,658	+				+0.1
3,984,677	-				+0.1
3,984,765	+				-0.7
3,984,765	+				+1.7
3,984,765	+				-0.6
3,984,765	+				-0.4
3,984,765	+				-0.2
3,984,765	+				-0.4
3,984,766	-				+0.7
3,984,766	-				-0.4
3,984,766	-				+0.2
3,984,766	-				+0.3
3,984,768	+				-1.0
3,984,768	+				-0.3
3,984,768	+				+0.7
3,984,769	-				-0.5
3,984,769	-				+0.7
3,984,769	-				-0.9
3,984,785	+				-0.5
3,984,821	-				-1.9
3,984,850	+		HGI48_RS17765	0.14	+0.7
3,985,096	-		HGI48_RS17765	0.58	-0.3
3,985,183	+		HGI48_RS17765	0.73	-1.4
3,985,184	-				+0.7
3,985,184	-		HGI48_RS17765	0.73	+0.5
3,985,184	-		HGI48_RS17765	0.73	-0.9
3,985,184	-				+2.3
3,985,184	-		HGI48_RS17765	0.73	+0.4
3,985,231	-		HGI48_RS17765	0.81	-0.2
3,985,243	+		HGI48_RS17765	0.84	+1.0
3,985,243	+		HGI48_RS17765	0.84	+0.2
3,985,244	-		HGI48_RS17765	0.84	-0.0
3,985,244	-		HGI48_RS17765	0.84	-0.1
3,985,244	-		HGI48_RS17765	0.84	-0.6
3,985,244	-		HGI48_RS17765	0.84	+0.2
3,985,304	-				-0.1
3,985,329	+				-1.3
3,985,329	+				+1.5
3,985,330	-				-0.3
3,985,333	+				-0.4
3,985,333	+				+0.4
3,985,333	+				+0.7
3,985,334	-				+0.7
3,985,334	-				-0.6
3,985,349	+				+0.5
3,985,350	-				-0.5
3,985,450	+				-1.1
3,985,450	+				+1.3
3,985,450	+				-1.2
3,985,450	+				+1.4
3,985,451	-				-2.1
3,985,451	-				-2.1
3,985,451	-				-1.0
3,985,451	-				-2.9
3,985,451	-				-0.9
3,985,606	+				+0.1
3,985,740	-				-0.3
3,985,842	+		HGI48_RS17770	0.44	-1.9
3,985,843	-		HGI48_RS17770	0.45	-2.3
3,985,941	-				+0.1
3,986,063	+		HGI48_RS17770	0.71	-2.4
3,986,196	-		HGI48_RS17770	0.87	+0.9
3,986,254	-				+1.3
3,986,254	-				-0.0
3,986,260	-				-0.1
3,986,270	+				-1.6
3,986,298	-				-1.3
3,986,314	-				+0.7
3,986,326	+				+0.3