Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS17750

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,981,064	+		HGI48_RS17745	0.35	-2.9
3,981,064	+		HGI48_RS17745	0.35	-1.3
3,981,064	+		HGI48_RS17745	0.35	-1.6
3,981,064	+		HGI48_RS17745	0.35	-2.8
3,981,065	-		HGI48_RS17745	0.35	-2.1
3,981,065	-		HGI48_RS17745	0.35	-0.1
3,981,065	-		HGI48_RS17745	0.35	-1.2
3,981,065	-		HGI48_RS17745	0.35	-0.1
3,981,069	-		HGI48_RS17745	0.36	-0.5
3,981,069	-		HGI48_RS17745	0.36	-0.1
3,981,249	+		HGI48_RS17745	0.56	-0.3
3,981,249	+				-0.9
3,981,250	-		HGI48_RS17745	0.56	-1.3
3,981,250	-		HGI48_RS17745	0.56	-0.2
3,981,292	+		HGI48_RS17745	0.61	-0.6
3,981,292	+				+0.7
3,981,369	+		HGI48_RS17745	0.69	+0.4
3,981,369	+		HGI48_RS17745	0.69	-0.3
3,981,370	-		HGI48_RS17745	0.70	-1.8
3,981,624	+				-0.6
3,981,652	+				-0.5
3,981,652	+				+0.7
3,981,653	-				+0.4
3,981,653	-				-1.1
3,981,653	-				+0.3
3,981,659	+				+1.4
3,981,659	+				+0.7
3,981,659	+				-0.9
3,981,660	-				-0.2
3,981,676	+				-0.1
3,981,676	+				+0.1
3,981,676	+				-0.7
3,981,676	+				+1.7
3,981,676	+				+0.3
3,981,676	+				+1.5
3,981,676	+				-0.6
3,981,677	-				+0.4
3,981,677	-				+1.3
3,981,677	-				-1.1
3,981,677	-				+1.7
3,981,677	-				-0.1
3,981,677	-				-1.4
3,981,677	-				+0.9
3,981,693	+				+0.7
3,981,693	+				+1.4
3,981,694	-				+0.4
3,981,694	-				-0.5
3,981,700	-				-1.6
3,981,717	-				-0.5
3,981,717	-				-0.1
3,981,717	-				+1.5
3,981,717	-				+2.7
3,981,717	-				+0.2
3,981,720	+				-0.1
3,981,720	+				+1.3
3,981,720	+				+1.5
3,981,762	+				-0.5
3,981,841	-				+1.4
3,981,891	+				+1.0
3,981,899	+				+0.6
3,981,899	+				-0.4
3,981,900	-				+0.1
3,981,900	-				+1.3
3,981,900	-				-0.2
3,981,900	-				+1.4
3,981,915	+				+0.0
3,981,915	+				-1.6
3,982,048	+				+0.3
3,982,048	+				+0.7
3,982,048	+				+0.7
3,982,048	+				+0.1
3,982,048	+				+1.1
3,982,048	+				-0.6
3,982,048	+				-0.5
3,982,048	+				+0.3
3,982,048	+				+0.4
3,982,049	-				+0.4
3,982,049	-				+1.4
3,982,049	-				-0.8
3,982,049	-				+0.0
3,982,049	-				+0.0
3,982,049	-				+0.3
3,982,049	-				+3.3
3,982,059	+				+0.3
3,982,059	+				-1.0
3,982,060	-				-0.1
3,982,060	-				-0.3
3,982,060	-				-1.3
3,982,060	-				-2.9
3,982,060	-				+1.0
3,982,063	+				+1.3
3,982,063	+				-0.2
3,982,063	+				+0.9
3,982,063	+				-1.1
3,982,063	+				+0.8
3,982,063	+				+0.9
3,982,063	+				-0.5
3,982,063	+				-0.9
3,982,063	+				+0.1
3,982,063	+				-0.0
3,982,064	-				+1.1
3,982,064	-				-1.3
3,982,064	-				+0.3
3,982,064	-				-0.3
3,982,064	-				+1.0
3,982,256	+				-0.9
3,982,257	-		HGI48_RS17750	0.28	+0.5
3,982,257	-		HGI48_RS17750	0.28	+0.7
3,982,342	+		HGI48_RS17750	0.40	-1.3
3,982,343	-		HGI48_RS17750	0.40	-1.4
3,982,455	+		HGI48_RS17750	0.55	+0.5
3,982,455	+		HGI48_RS17750	0.55	-2.3
3,982,594	+				+0.7
3,982,594	+		HGI48_RS17750	0.74	-0.2
3,982,595	-		HGI48_RS17750	0.74	+0.0
3,982,895	+		HGI48_RS17755	0.13	-1.9
3,982,967	-		HGI48_RS17755	0.22	-1.5
3,983,098	+		HGI48_RS17755	0.37	+0.0
3,983,098	+		HGI48_RS17755	0.37	-0.5
3,983,099	-		HGI48_RS17755	0.37	-0.6
3,983,099	-				+0.7
3,983,099	-		HGI48_RS17755	0.37	+0.2
3,983,099	-		HGI48_RS17755	0.37	+0.1
3,983,261	-		HGI48_RS17755	0.56	-2.1
3,983,527	+		HGI48_RS17755	0.87	+0.1
3,983,527	+		HGI48_RS17755	0.87	+0.7
3,983,527	+		HGI48_RS17755	0.87	-0.3
3,983,527	+		HGI48_RS17755	0.87	-0.5
3,983,528	-		HGI48_RS17755	0.87	-1.6
3,983,528	-				+0.7
3,983,531	-		HGI48_RS17755	0.87	-0.7
3,983,531	-		HGI48_RS17755	0.87	+0.4
3,983,531	-		HGI48_RS17755	0.87	+0.1
3,983,531	-		HGI48_RS17755	0.87	+0.6
3,983,571	+				-1.6
3,983,571	+				+1.1
3,983,571	+				+0.3
3,983,572	-				+0.0
3,983,642	+				-0.8
3,983,643	-				-0.3
3,983,643	-				-1.2
3,983,724	-				-1.1
3,983,724	-				+0.3