Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS17455

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,907,699	+		HGI48_RS17450	0.62	-1.7
3,907,699	+		HGI48_RS17450	0.62	-1.4
3,907,795	-		HGI48_RS17450	0.72	-0.2
3,907,815	+		HGI48_RS17450	0.74	-1.2
3,907,815	+		HGI48_RS17450	0.74	-0.6
3,907,815	+		HGI48_RS17450	0.74	-1.9
3,907,815	+		HGI48_RS17450	0.74	-0.1
3,907,816	-				+1.1
3,907,816	-		HGI48_RS17450	0.74	-1.1
3,907,816	-		HGI48_RS17450	0.74	+0.4
3,907,816	-				+1.2
3,907,816	-		HGI48_RS17450	0.74	+0.3
3,907,816	-		HGI48_RS17450	0.74	-0.7
3,907,816	-		HGI48_RS17450	0.74	+1.8
3,907,816	-		HGI48_RS17450	0.74	-1.7
3,907,816	-		HGI48_RS17450	0.74	-0.3
3,907,916	+		HGI48_RS17450	0.84	+0.4
3,907,939	+				+1.4
3,907,939	+		HGI48_RS17450	0.86	-2.2
3,907,939	+		HGI48_RS17450	0.86	-0.4
3,907,939	+		HGI48_RS17450	0.86	-1.4
3,907,939	+		HGI48_RS17450	0.86	-1.0
3,907,940	-				-0.9
3,908,153	-				-0.9
3,908,162	+				+1.8
3,908,163	-				+1.9
3,908,251	-				+1.2
3,908,251	-				+1.4
3,908,260	+				+0.9
3,908,264	+				-0.2
3,908,264	+				-0.9
3,908,402	-				-0.6
3,908,408	-				-0.4
3,908,441	-				-0.7
3,908,559	-				-0.5
3,908,578	+				-1.3
3,908,579	-				+1.0
3,908,646	-				-0.3
3,908,663	-				-1.1
3,908,788	+		HGI48_RS17455	0.10	+0.3
3,908,789	-		HGI48_RS17455	0.10	+0.8
3,908,792	+		HGI48_RS17455	0.11	-0.2
3,908,793	-		HGI48_RS17455	0.11	-1.9
3,908,830	+		HGI48_RS17455	0.14	-0.4
3,908,830	+		HGI48_RS17455	0.14	+1.6
3,908,831	-		HGI48_RS17455	0.14	-0.4
3,908,848	-		HGI48_RS17455	0.15	-0.2
3,908,932	+		HGI48_RS17455	0.23	+0.2
3,909,026	-		HGI48_RS17455	0.31	-1.2
3,909,056	+		HGI48_RS17455	0.33	-0.1
3,909,057	-				+1.6
3,909,065	+		HGI48_RS17455	0.34	+0.3
3,909,066	-		HGI48_RS17455	0.34	+0.1
3,909,103	+		HGI48_RS17455	0.37	-0.5
3,909,107	+		HGI48_RS17455	0.38	-0.2
3,909,171	-		HGI48_RS17455	0.43	+0.2
3,909,176	+				+0.1
3,909,177	-		HGI48_RS17455	0.44	-0.5
3,909,177	-		HGI48_RS17455	0.44	-0.7
3,909,192	-		HGI48_RS17455	0.45	+1.3
3,909,200	+		HGI48_RS17455	0.46	-1.4
3,909,200	+		HGI48_RS17455	0.46	-0.2
3,909,207	+		HGI48_RS17455	0.46	-0.1
3,909,207	+				+0.1
3,909,207	+		HGI48_RS17455	0.46	+0.2
3,909,207	+		HGI48_RS17455	0.46	-0.4
3,909,208	-		HGI48_RS17455	0.46	-0.9
3,909,263	+		HGI48_RS17455	0.51	+0.2
3,909,263	+		HGI48_RS17455	0.51	-0.4
3,909,383	+		HGI48_RS17455	0.61	-0.1
3,909,383	+		HGI48_RS17455	0.61	-1.7
3,909,383	+		HGI48_RS17455	0.61	-0.4
3,909,384	-		HGI48_RS17455	0.61	-0.6
3,909,384	-		HGI48_RS17455	0.61	+1.0
3,909,393	+		HGI48_RS17455	0.62	-0.4
3,909,455	+		HGI48_RS17455	0.67	-0.2
3,909,455	+		HGI48_RS17455	0.67	-0.2
3,909,455	+		HGI48_RS17455	0.67	-1.2
3,909,456	-				+1.6
3,909,456	-		HGI48_RS17455	0.67	-1.2
3,909,456	-		HGI48_RS17455	0.67	-0.8
3,909,456	-		HGI48_RS17455	0.67	-0.8
3,909,456	-		HGI48_RS17455	0.67	-2.2
3,909,459	+				+1.4
3,909,460	-		HGI48_RS17455	0.68	-0.7
3,909,460	-		HGI48_RS17455	0.68	+0.6
3,909,487	+		HGI48_RS17455	0.70	-0.9
3,909,571	+		HGI48_RS17455	0.77	-0.1
3,909,572	-		HGI48_RS17455	0.77	-0.9
3,909,572	-		HGI48_RS17455	0.77	-0.5
3,909,572	-		HGI48_RS17455	0.77	-0.4
3,909,705	-		HGI48_RS17455	0.89	+1.2
3,909,966	+		HGI48_RS17460	0.46	-1.0
3,910,134	+				-1.5
3,910,135	-				+0.8
3,910,135	-				-0.3
3,910,200	+				+0.6
3,910,201	-				+0.1
3,910,409	+		HGI48_RS17465	0.22	-0.4
3,910,409	+		HGI48_RS17465	0.22	-0.0
3,910,409	+		HGI48_RS17465	0.22	+0.6
3,910,409	+		HGI48_RS17465	0.22	-0.5
3,910,409	+		HGI48_RS17465	0.22	+1.0
3,910,410	-		HGI48_RS17465	0.22	-0.9
3,910,410	-		HGI48_RS17465	0.22	-1.4
3,910,410	-		HGI48_RS17465	0.22	+0.4
3,910,410	-		HGI48_RS17465	0.22	+0.5
3,910,412	+		HGI48_RS17465	0.22	-1.2
3,910,413	-		HGI48_RS17465	0.22	-1.0
3,910,445	-		HGI48_RS17465	0.24	-0.9
3,910,446	+		HGI48_RS17465	0.25	+0.9
3,910,446	+		HGI48_RS17465	0.25	-1.3
3,910,447	-		HGI48_RS17465	0.25	-2.4
3,910,447	-		HGI48_RS17465	0.25	-1.1
3,910,447	-		HGI48_RS17465	0.25	-0.5
3,910,460	-		HGI48_RS17465	0.26	-0.6
3,910,628	+		HGI48_RS17465	0.39	+1.6
3,910,629	-		HGI48_RS17465	0.39	+0.8
3,910,665	+		HGI48_RS17465	0.42	+0.1
3,910,666	-		HGI48_RS17465	0.42	+0.2
3,910,666	-		HGI48_RS17465	0.42	+0.6
3,910,710	+		HGI48_RS17465	0.45	-0.6
3,910,710	+		HGI48_RS17465	0.45	+0.2
3,910,710	+		HGI48_RS17465	0.45	-0.1
3,910,711	-		HGI48_RS17465	0.45	+0.2
3,910,711	-		HGI48_RS17465	0.45	+1.1
3,910,737	+		HGI48_RS17465	0.48	-0.4
3,910,738	-		HGI48_RS17465	0.48	-0.1
3,910,738	-		HGI48_RS17465	0.48	-0.2
3,910,787	+		HGI48_RS17465	0.52	-0.2
3,910,787	+		HGI48_RS17465	0.52	-0.9
3,910,787	+		HGI48_RS17465	0.52	-0.4
3,910,788	-		HGI48_RS17465	0.52	+0.9