Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS16430

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,681,456	+		HGI48_RS16425	0.66	-0.6
3,681,456	+				+0.0
3,681,456	+		HGI48_RS16425	0.66	+0.6
3,681,457	-		HGI48_RS16425	0.66	-1.0
3,681,457	-		HGI48_RS16425	0.66	-1.0
3,681,467	+		HGI48_RS16425	0.67	-1.6
3,681,467	+		HGI48_RS16425	0.67	-0.6
3,681,467	+		HGI48_RS16425	0.67	+0.4
3,681,467	+		HGI48_RS16425	0.67	-0.8
3,681,467	+		HGI48_RS16425	0.67	+0.2
3,681,467	+		HGI48_RS16425	0.67	-1.4
3,681,468	-		HGI48_RS16425	0.67	+0.7
3,681,468	-		HGI48_RS16425	0.67	+0.6
3,681,468	-		HGI48_RS16425	0.67	-1.1
3,681,468	-				+1.6
3,681,468	-		HGI48_RS16425	0.67	-0.5
3,681,471	+		HGI48_RS16425	0.67	-0.5
3,681,471	+		HGI48_RS16425	0.67	+0.6
3,681,471	+		HGI48_RS16425	0.67	+0.2
3,681,471	+		HGI48_RS16425	0.67	-1.7
3,681,471	+		HGI48_RS16425	0.67	+0.3
3,681,471	+		HGI48_RS16425	0.67	-0.4
3,681,543	+				+1.2
3,681,543	+		HGI48_RS16425	0.71	-0.1
3,681,544	-		HGI48_RS16425	0.71	-0.5
3,681,681	+		HGI48_RS16425	0.79	+0.2
3,681,681	+		HGI48_RS16425	0.79	-1.4
3,681,682	-		HGI48_RS16425	0.79	+0.2
3,681,694	-		HGI48_RS16425	0.80	+0.6
3,681,694	-		HGI48_RS16425	0.80	-1.5
3,681,694	-		HGI48_RS16425	0.80	+0.7
3,681,876	+				+0.0
3,681,877	-				+1.0
3,681,888	+				-0.7
3,681,888	+				-0.4
3,681,888	+				+0.3
3,681,888	+				+0.4
3,681,888	+				+0.8
3,681,889	-				-1.9
3,681,889	-				+0.0
3,681,889	-				-1.7
3,681,889	-				-0.3
3,681,889	-				-1.0
3,681,889	-				-0.4
3,681,890	+				-0.1
3,681,890	+				+0.0
3,681,890	+				+0.6
3,681,890	+				-1.9
3,681,890	+				+0.0
3,681,890	+				-0.2
3,681,890	+				+0.9
3,681,890	+				-1.3
3,681,891	-				+0.0
3,681,891	-				-0.1
3,681,891	-				-2.0
3,681,891	-				+0.2
3,681,891	-				+0.6
3,681,891	-				-0.6
3,681,973	-				-1.2
3,681,993	+				-0.1
3,681,993	+				+0.6
3,681,993	+				-0.4
3,681,993	+				+0.3
3,681,993	+				+0.3
3,681,993	+				-1.4
3,681,994	-				-0.2
3,682,239	-				+1.2
3,682,431	-				-0.4
3,682,604	+		HGI48_RS16430	0.11	+0.9
3,682,684	+		HGI48_RS16430	0.17	-0.5
3,682,684	+		HGI48_RS16430	0.17	+0.9
3,682,691	+		HGI48_RS16430	0.18	-0.4
3,682,691	+		HGI48_RS16430	0.18	+0.3
3,682,692	-		HGI48_RS16430	0.18	-0.2
3,682,692	-		HGI48_RS16430	0.18	-0.7
3,682,692	-		HGI48_RS16430	0.18	+0.4
3,682,692	-		HGI48_RS16430	0.18	-0.1
3,682,695	+		HGI48_RS16430	0.18	+0.4
3,682,695	+		HGI48_RS16430	0.18	+0.4
3,682,695	+		HGI48_RS16430	0.18	-0.3
3,682,695	+		HGI48_RS16430	0.18	-0.1
3,682,695	+		HGI48_RS16430	0.18	-0.4
3,682,695	+		HGI48_RS16430	0.18	+0.6
3,682,695	+				+2.4
3,682,695	+		HGI48_RS16430	0.18	-0.7
3,682,695	+		HGI48_RS16430	0.18	-1.6
3,682,695	+		HGI48_RS16430	0.18	-1.7
3,682,695	+		HGI48_RS16430	0.18	+0.4
3,682,695	+		HGI48_RS16430	0.18	+1.0
3,682,696	-		HGI48_RS16430	0.18	+1.1
3,682,696	-		HGI48_RS16430	0.18	-0.6
3,682,696	-		HGI48_RS16430	0.18	+0.2
3,682,696	-		HGI48_RS16430	0.18	-0.8
3,682,696	-		HGI48_RS16430	0.18	+0.3
3,682,949	+		HGI48_RS16430	0.36	-1.0
3,682,949	+		HGI48_RS16430	0.36	-3.5
3,682,950	-				+0.6
3,683,266	+		HGI48_RS16430	0.59	-0.4
3,683,456	+		HGI48_RS16430	0.73	-0.3
3,683,457	-		HGI48_RS16430	0.73	-1.4
3,683,457	-		HGI48_RS16430	0.73	-0.4
3,683,707	+				-2.2
3,683,707	+				-0.8
3,683,708	-				-0.3
3,683,735	+				-1.6
3,683,735	+				-0.6
3,683,735	+				+1.0
3,683,736	-				+0.9
3,683,736	-				-1.2
3,683,736	-				-0.2
3,683,736	-				-0.2
3,683,997	+				+0.4
3,683,997	+				-0.4
3,683,998	-				+0.9
3,683,998	-				-0.6
3,684,039	+				-0.4
3,684,039	+				-0.3
3,684,147	+				+0.6
3,684,148	-				-0.4
3,684,148	-				+0.6
3,684,148	-				-0.7
3,684,176	+				-1.0
3,684,272	+		HGI48_RS16435	0.13	-0.2
3,684,291	+		HGI48_RS16435	0.14	+0.3
3,684,369	+		HGI48_RS16435	0.22	-2.0
3,684,370	-		HGI48_RS16435	0.22	+0.4
3,684,370	-		HGI48_RS16435	0.22	+0.0
3,684,370	-		HGI48_RS16435	0.22	-2.4
3,684,403	+		HGI48_RS16435	0.25	+0.1
3,684,403	+				+1.3
3,684,541	-		HGI48_RS16435	0.38	+0.8
3,684,541	-		HGI48_RS16435	0.38	-0.1
3,684,585	+		HGI48_RS16435	0.43	+1.6
3,684,585	+		HGI48_RS16435	0.43	-2.0
3,684,585	+		HGI48_RS16435	0.43	-0.6
3,684,585	+				+2.2
3,684,585	+		HGI48_RS16435	0.43	-1.4
3,684,586	-		HGI48_RS16435	0.43	-0.2
3,684,586	-		HGI48_RS16435	0.43	+1.6
3,684,586	-				+1.6
3,684,586	-		HGI48_RS16435	0.43	+0.9
3,684,595	+		HGI48_RS16435	0.43	-0.6
3,684,595	+		HGI48_RS16435	0.43	+1.2
3,684,595	+		HGI48_RS16435	0.43	+0.1
3,684,596	-		HGI48_RS16435	0.44	-1.4
3,684,596	-		HGI48_RS16435	0.44	+0.0
3,684,737	+		HGI48_RS16435	0.57	-0.7
3,684,738	-		HGI48_RS16435	0.57	-0.7
3,684,777	-		HGI48_RS16435	0.61	+0.4