Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS16355

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,662,792	-				+1.9
3,662,853	+				-1.0
3,662,853	+				-0.8
3,662,853	+				-2.2
3,662,853	+				-1.0
3,662,853	+				+1.6
3,662,853	+				-0.4
3,662,853	+				-0.9
3,662,854	-				+1.3
3,662,854	-				-1.0
3,662,854	-				-0.4
3,662,854	-				-0.7
3,662,854	-				-0.3
3,662,854	-				+1.3
3,662,854	-				+0.4
3,662,855	+				-1.0
3,662,898	+		HGI48_RS16350	0.13	-0.4
3,662,899	-		HGI48_RS16350	0.13	+0.6
3,662,978	+		HGI48_RS16350	0.29	+0.1
3,662,978	+		HGI48_RS16350	0.29	+1.0
3,662,979	-		HGI48_RS16350	0.30	-0.6
3,662,979	-		HGI48_RS16350	0.30	+0.0
3,662,982	+		HGI48_RS16350	0.30	+0.0
3,662,982	+		HGI48_RS16350	0.30	-2.4
3,662,983	-		HGI48_RS16350	0.30	+0.2
3,662,983	-		HGI48_RS16350	0.30	-0.1
3,663,013	+		HGI48_RS16350	0.37	+1.1
3,663,013	+				-0.4
3,663,014	-		HGI48_RS16350	0.37	-0.7
3,663,022	+				+1.2
3,663,028	+		HGI48_RS16350	0.40	+0.8
3,663,061	+		HGI48_RS16350	0.46	+0.9
3,663,061	+		HGI48_RS16350	0.46	+0.0
3,663,061	+				-1.0
3,663,061	+				+1.3
3,663,061	+		HGI48_RS16350	0.46	-1.4
3,663,062	-		HGI48_RS16350	0.47	-1.7
3,663,071	-				+1.0
3,663,097	+		HGI48_RS16350	0.54	+0.6
3,663,097	+		HGI48_RS16350	0.54	-0.6
3,663,097	+		HGI48_RS16350	0.54	+0.5
3,663,097	+		HGI48_RS16350	0.54	-0.3
3,663,098	-		HGI48_RS16350	0.54	-1.4
3,663,098	-		HGI48_RS16350	0.54	+0.0
3,663,098	-		HGI48_RS16350	0.54	+0.4
3,663,098	-				+1.2
3,663,100	+		HGI48_RS16350	0.54	-0.1
3,663,101	-		HGI48_RS16350	0.55	+0.8
3,663,101	-		HGI48_RS16350	0.55	-0.4
3,663,101	-		HGI48_RS16350	0.55	+1.2
3,663,101	-		HGI48_RS16350	0.55	-1.4
3,663,101	-		HGI48_RS16350	0.55	+0.2
3,663,102	+		HGI48_RS16350	0.55	-1.4
3,663,103	-		HGI48_RS16350	0.55	+0.8
3,663,114	+		HGI48_RS16350	0.57	-0.7
3,663,237	+		HGI48_RS16350	0.82	+0.0
3,663,322	+				-0.1
3,663,322	+				+0.8
3,663,322	+				+0.2
3,663,322	+				+2.2
3,663,323	-				+0.3
3,663,323	-				-1.3
3,663,323	-				+0.0
3,663,323	-				-0.3
3,663,323	-				-2.6
3,663,357	+				+0.2
3,663,357	+				+0.2
3,663,409	+				+0.6
3,663,409	+				-1.0
3,663,409	+				+1.0
3,663,410	-				+2.2
3,663,410	-				-0.2
3,663,410	-				-0.2
3,663,429	-				-0.7
3,663,565	+		HGI48_RS16355	0.18	-2.4
3,663,565	+		HGI48_RS16355	0.18	+0.6
3,663,566	-		HGI48_RS16355	0.18	-3.0
3,663,572	-				-1.0
3,663,635	+		HGI48_RS16355	0.25	+0.6
3,664,046	-		HGI48_RS16355	0.63	-1.7
3,664,136	-		HGI48_RS16355	0.71	-3.3
3,664,213	-		HGI48_RS16355	0.78	-1.4
3,664,367	+				+0.2
3,664,495	-				+0.2
3,664,533	-				-1.1
3,664,533	-				+0.2
3,664,533	-				+0.2
3,664,554	+				+0.0
3,664,555	-				+0.0
3,664,561	+				-0.1
3,664,836	+		HGI48_RS16360	0.57	+0.2
3,664,836	+		HGI48_RS16360	0.57	-0.2
3,664,837	-		HGI48_RS16360	0.57	-1.6
3,664,837	-		HGI48_RS16360	0.57	+0.8
3,664,837	-		HGI48_RS16360	0.57	-1.1
3,664,837	-				+0.0
3,664,837	-		HGI48_RS16360	0.57	-0.1
3,664,875	+		HGI48_RS16360	0.65	-1.6
3,664,880	+		HGI48_RS16360	0.66	+0.1
3,664,880	+		HGI48_RS16360	0.66	+1.1
3,664,881	-		HGI48_RS16360	0.66	+0.0
3,664,929	+				+0.0
3,664,929	+		HGI48_RS16360	0.76	-1.4
3,665,029	+				+0.6
3,665,029	+				-0.7
3,665,029	+				-0.7
3,665,030	-				-1.0
3,665,063	-				+0.6
3,665,079	+				-0.4
3,665,082	+				-1.0
3,665,083	-				-1.7
3,665,083	-				+0.2
3,665,182	+				-0.4
3,665,183	-				-0.3
3,665,183	-				-1.7
3,665,183	-				-0.4
3,665,185	+				-1.4
3,665,186	-				-0.4
3,665,202	+				+1.2
3,665,202	+				-0.8
3,665,202	+				-1.0
3,665,202	+				-1.0
3,665,203	-				-0.1
3,665,203	-				+1.1
3,665,204	+				-1.0
3,665,204	+				+0.6
3,665,204	+				+1.4
3,665,204	+				+1.6
3,665,205	-				-0.2
3,665,205	-				+1.0
3,665,220	+				+0.2
3,665,220	+				+0.9
3,665,220	+				+1.8
3,665,221	-				-0.4
3,665,223	+				+0.1
3,665,242	-				+1.0
3,665,281	+				+0.2
3,665,334	-				-1.0
3,665,348	+				-0.1
3,665,349	-				+0.1
3,665,421	+				+1.0
3,665,422	-				+0.6
3,665,422	-				+0.9
3,665,422	-				+0.4
3,665,422	-				-0.5
3,665,422	-				-0.7
3,665,431	-				-0.4