Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS16050

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,607,652	+				+0.2
3,607,652	+				-2.1
3,607,652	+				+1.7
3,607,652	+				-1.2
3,607,653	-				+1.3
3,607,653	-				-0.6
3,607,653	-				-0.0
3,607,653	-				+0.3
3,607,653	-				+0.6
3,607,653	-				-0.4
3,607,703	-				-1.4
3,607,843	+		HGI48_RS16045	0.26	-0.4
3,607,844	-		HGI48_RS16045	0.26	-2.0
3,607,896	-		HGI48_RS16045	0.33	-1.4
3,607,993	+		HGI48_RS16045	0.47	-0.1
3,608,016	-		HGI48_RS16045	0.50	-2.0
3,608,024	+		HGI48_RS16045	0.51	+0.1
3,608,024	+				+2.6
3,608,025	-		HGI48_RS16045	0.51	+0.2
3,608,025	-		HGI48_RS16045	0.51	+0.7
3,608,025	-		HGI48_RS16045	0.51	-0.8
3,608,027	+		HGI48_RS16045	0.51	-0.8
3,608,053	+		HGI48_RS16045	0.55	+0.1
3,608,053	+		HGI48_RS16045	0.55	-0.9
3,608,053	+		HGI48_RS16045	0.55	+1.4
3,608,054	-		HGI48_RS16045	0.55	+0.2
3,608,054	-		HGI48_RS16045	0.55	-0.1
3,608,054	-		HGI48_RS16045	0.55	+0.3
3,608,054	-		HGI48_RS16045	0.55	-2.6
3,608,056	-		HGI48_RS16045	0.55	+1.3
3,608,056	-		HGI48_RS16045	0.55	-2.3
3,608,099	-		HGI48_RS16045	0.61	-0.7
3,608,099	-		HGI48_RS16045	0.61	+0.4
3,608,235	+		HGI48_RS16045	0.80	-0.4
3,608,235	+		HGI48_RS16045	0.80	+1.6
3,608,236	-		HGI48_RS16045	0.80	+0.0
3,608,236	-		HGI48_RS16045	0.80	-0.5
3,608,236	-		HGI48_RS16045	0.80	+0.6
3,608,236	-		HGI48_RS16045	0.80	-0.4
3,608,236	-		HGI48_RS16045	0.80	-0.2
3,608,248	+		HGI48_RS16045	0.82	+0.6
3,608,249	-		HGI48_RS16045	0.82	+1.2
3,608,258	+		HGI48_RS16045	0.83	-0.5
3,608,258	+		HGI48_RS16045	0.83	-0.3
3,608,261	+				+2.7
3,608,262	-		HGI48_RS16045	0.84	-0.6
3,608,262	-		HGI48_RS16045	0.84	+1.9
3,608,300	-		HGI48_RS16045	0.89	-2.6
3,608,300	-				+1.6
3,608,311	-				+0.1
3,608,311	-				+2.2
3,608,346	-				+0.2
3,608,374	+				-0.7
3,608,374	+				-0.2
3,608,374	+				+0.6
3,608,375	-				-1.4
3,608,390	+				-2.6
3,608,390	+				+0.8
3,608,394	+				+0.7
3,608,394	+				-2.0
3,608,394	+				+0.0
3,608,395	-				-0.3
3,608,397	+				+0.9
3,608,397	+				+0.2
3,608,397	+				+0.3
3,608,397	+				-0.8
3,608,397	+				+1.1
3,608,398	-				+0.6
3,608,398	-				+1.1
3,608,398	-				-0.8
3,608,410	+				-0.1
3,608,410	+				-1.3
3,608,411	-				+1.8
3,608,461	+				-1.2
3,608,461	+				+0.8
3,608,462	-				+0.0
3,608,462	-				+1.0
3,608,476	-				-2.0
3,608,479	+				+0.2
3,608,480	-				-0.4
3,608,531	+				-0.4
3,608,532	-				-2.0
3,608,532	-				+0.2
3,608,535	+				-0.7
3,608,535	+				-0.3
3,608,535	+				-0.2
3,608,536	-				-0.4
3,608,536	-				+1.0
3,608,638	+		HGI48_RS16050	0.20	-1.6
3,608,673	+		HGI48_RS16050	0.27	-1.5
3,609,026	-				+0.6
3,609,054	+				-0.2
3,609,054	+				+0.2
3,609,054	+				-1.0
3,609,054	+				+0.5
3,609,054	+				-0.4
3,609,054	+				-0.1
3,609,055	-				-0.2
3,609,055	-				-0.7
3,609,055	-				+0.9
3,609,055	-				+0.2
3,609,055	-				+0.6
3,609,055	-				+0.3
3,609,076	+				+1.3
3,609,097	-				-0.8
3,609,097	-				-0.5
3,609,115	+				-1.0
3,609,115	+				-2.0
3,609,115	+				-0.2
3,609,115	+				+0.1
3,609,116	-				-1.0
3,609,116	-				-0.7
3,609,116	-				+0.9
3,609,116	-				+0.6
3,609,188	-		HGI48_RS16055	0.10	-1.0
3,609,188	-		HGI48_RS16055	0.10	+0.2
3,609,188	-		HGI48_RS16055	0.10	-0.4
3,609,188	-		HGI48_RS16055	0.10	-0.7
3,609,188	-		HGI48_RS16055	0.10	+0.9
3,609,188	-		HGI48_RS16055	0.10	+0.8
3,609,188	-		HGI48_RS16055	0.10	+0.2
3,609,188	-		HGI48_RS16055	0.10	+0.6
3,609,188	-		HGI48_RS16055	0.10	-0.3
3,609,188	-		HGI48_RS16055	0.10	+0.9
3,609,298	+		HGI48_RS16055	0.22	+0.7
3,609,298	+		HGI48_RS16055	0.22	-1.2
3,609,299	-		HGI48_RS16055	0.22	+0.7
3,609,299	-		HGI48_RS16055	0.22	-0.8
3,609,394	+		HGI48_RS16055	0.33	-1.4
3,609,394	+		HGI48_RS16055	0.33	-0.1
3,609,394	+		HGI48_RS16055	0.33	+1.6
3,609,394	+		HGI48_RS16055	0.33	-0.0
3,609,394	+		HGI48_RS16055	0.33	-1.0
3,609,397	+		HGI48_RS16055	0.33	-0.4
3,609,397	+		HGI48_RS16055	0.33	-0.2
3,609,442	+				-1.0
3,609,443	-		HGI48_RS16055	0.38	-0.4
3,609,443	-				+1.0
3,609,582	+		HGI48_RS16055	0.53	-1.0
3,609,583	-		HGI48_RS16055	0.53	-0.2
3,609,585	+				+1.8
3,609,585	+				-0.0
3,609,704	+		HGI48_RS16055	0.67	-0.2
3,609,710	+		HGI48_RS16055	0.67	-1.4
3,609,710	+		HGI48_RS16055	0.67	+0.4
3,609,712	+		HGI48_RS16055	0.68	-1.8
3,609,743	-		HGI48_RS16055	0.71	+1.2
3,609,743	-		HGI48_RS16055	0.71	-0.9
3,609,966	+				-0.4
3,609,980	+				-0.8
3,609,981	-				+0.9