Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS15230

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,429,000	-		HGI48_RS15225	0.61	-0.8
3,429,068	+		HGI48_RS15225	0.65	-1.5
3,429,461	+		HGI48_RS15225	0.84	-1.6
3,429,686	-				+0.5
3,429,757	-				-0.9
3,429,762	+				-1.2
3,429,764	+				-1.8
3,429,765	-				-1.0
3,429,819	+				-0.2
3,429,820	-				-0.4
3,429,820	-				-0.5
3,429,820	-				+1.8
3,429,885	-				-0.8
3,430,072	-		HGI48_RS15230	0.17	-1.1
3,430,132	-		HGI48_RS15230	0.21	-1.8
3,430,132	-		HGI48_RS15230	0.21	-1.5
3,430,151	+		HGI48_RS15230	0.23	-1.3
3,430,151	+		HGI48_RS15230	0.23	-0.5
3,430,151	+		HGI48_RS15230	0.23	-0.7
3,430,152	-		HGI48_RS15230	0.23	-2.0
3,430,152	-		HGI48_RS15230	0.23	-0.5
3,430,221	+		HGI48_RS15230	0.27	-0.9
3,430,425	+		HGI48_RS15230	0.41	-1.3
3,430,425	+		HGI48_RS15230	0.41	-0.2
3,430,425	+		HGI48_RS15230	0.41	-0.7
3,430,425	+		HGI48_RS15230	0.41	-1.8
3,430,426	-		HGI48_RS15230	0.41	-0.7
3,430,426	-		HGI48_RS15230	0.41	-1.3
3,430,426	-		HGI48_RS15230	0.41	-0.3
3,430,429	+		HGI48_RS15230	0.41	-2.1
3,430,430	-		HGI48_RS15230	0.41	-1.5
3,430,430	-		HGI48_RS15230	0.41	-0.1
3,430,441	+		HGI48_RS15230	0.42	+0.2
3,430,441	+		HGI48_RS15230	0.42	-3.1
3,430,442	-		HGI48_RS15230	0.42	-0.1
3,430,442	-		HGI48_RS15230	0.42	-1.1
3,430,616	+		HGI48_RS15230	0.53	-0.1
3,430,616	+		HGI48_RS15230	0.53	+0.5
3,430,616	+		HGI48_RS15230	0.53	-0.3
3,430,617	-		HGI48_RS15230	0.53	-1.5
3,430,697	+		HGI48_RS15230	0.58	-0.6
3,430,783	+		HGI48_RS15230	0.64	-0.7
3,430,783	+		HGI48_RS15230	0.64	+0.8
3,430,789	-		HGI48_RS15230	0.64	-1.3
3,430,942	-		HGI48_RS15230	0.74	-1.1
3,430,966	+		HGI48_RS15230	0.76	-1.2
3,430,966	+		HGI48_RS15230	0.76	-0.8
3,430,967	-		HGI48_RS15230	0.76	-1.0
3,431,019	-		HGI48_RS15230	0.79	-2.1
3,431,019	-		HGI48_RS15230	0.79	-1.4
3,431,101	+		HGI48_RS15230	0.85	-0.6
3,431,101	+		HGI48_RS15230	0.85	-0.2
3,431,101	+		HGI48_RS15230	0.85	-0.8
3,431,102	-		HGI48_RS15230	0.85	-1.5
3,431,282	-				-1.3
3,431,360	+				-1.1
3,431,360	+				+0.7
3,431,360	+				-0.2
3,431,381	+				-0.1
3,431,381	+				-1.3
3,431,382	-				-0.7
3,431,382	-				+1.3
3,431,425	+				-2.3
3,431,512	+				+1.0
3,431,512	+				+1.0
3,431,513	-				-2.1
3,431,579	-				+0.7
3,431,606	+				+0.2
3,431,606	+				-0.1
3,431,614	+				-0.2
3,431,614	+				-0.3
3,431,626	+				+2.1
3,431,626	+				+0.0
3,431,626	+				-0.5
3,431,626	+				+1.8
3,431,626	+				+1.3
3,431,627	-				+0.3
3,431,627	-				-0.3
3,431,627	-				-1.8
3,431,636	+				-0.9
3,431,642	+				+1.1
3,431,643	-				+1.1
3,431,643	-				-0.7
3,431,807	+				+0.8
3,431,807	+				-1.1
3,431,808	-				+1.0
3,431,823	+				-1.1
3,431,824	-				+1.2
3,431,873	+				-0.3
3,431,873	+				+0.2
3,431,874	-				-0.1
3,431,874	-				-1.4
3,431,904	-				-0.1
3,431,904	-				+1.0
3,431,904	-				-0.0
3,431,936	-				-0.4
3,431,936	-				-0.1
3,431,952	+				-0.7
3,431,952	+				+0.3
3,431,952	+				+0.5
3,431,953	-				-0.6
3,431,953	-				-0.0
3,431,953	-				+0.0
3,431,953	-				-0.2
3,431,955	-				-0.3
3,431,970	+				-0.9
3,431,972	+				-0.5
3,431,972	+				+0.6
3,431,973	-				+0.7
3,432,123	+		HGI48_RS15235	0.42	-0.8
3,432,123	+		HGI48_RS15235	0.42	-0.8
3,432,123	+		HGI48_RS15235	0.42	-0.2
3,432,193	+		HGI48_RS15235	0.68	-1.8
3,432,194	-		HGI48_RS15235	0.68	+0.6
3,432,240	+		HGI48_RS15235	0.85	-0.2
3,432,241	-		HGI48_RS15235	0.86	+0.2
3,432,241	-		HGI48_RS15235	0.86	+0.8
3,432,241	-		HGI48_RS15235	0.86	+0.1
3,432,271	+				+0.3
3,432,272	-				-1.4
3,432,325	+				-0.7
3,432,325	+				-0.1
3,432,326	-				+0.0
3,432,326	-				+0.5
3,432,326	-				-2.1
3,432,326	-				-1.5
3,432,326	-				-1.1
3,432,326	-				+0.2