Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS14755

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,319,490	+		HGI48_RS14745	0.46	-0.1
3,319,491	-		HGI48_RS14745	0.47	-1.2
3,319,491	-		HGI48_RS14745	0.47	-1.7
3,319,491	-		HGI48_RS14745	0.47	+0.7
3,319,491	-		HGI48_RS14745	0.47	+0.0
3,319,542	+		HGI48_RS14745	0.55	+0.2
3,319,543	-		HGI48_RS14745	0.55	-0.8
3,319,543	-		HGI48_RS14745	0.55	-0.5
3,319,567	-		HGI48_RS14745	0.59	+0.0
3,319,567	-		HGI48_RS14745	0.59	-0.5
3,319,670	+		HGI48_RS14745	0.76	-0.5
3,319,671	-		HGI48_RS14745	0.76	+0.3
3,319,763	+				-0.3
3,319,764	-				+0.0
3,319,901	+		HGI48_RS14750	0.12	+0.2
3,319,902	-		HGI48_RS14750	0.12	-0.5
3,319,954	+		HGI48_RS14750	0.25	+1.1
3,320,089	+		HGI48_RS14750	0.58	-0.9
3,320,089	+		HGI48_RS14750	0.58	+0.5
3,320,089	+		HGI48_RS14750	0.58	-0.8
3,320,089	+		HGI48_RS14750	0.58	-0.5
3,320,090	-		HGI48_RS14750	0.59	+0.5
3,320,090	-		HGI48_RS14750	0.59	+0.5
3,320,093	+		HGI48_RS14750	0.59	-0.5
3,320,093	+		HGI48_RS14750	0.59	+0.5
3,320,093	+		HGI48_RS14750	0.59	+0.0
3,320,093	+		HGI48_RS14750	0.59	-1.4
3,320,094	-				+0.5
3,320,238	+				-1.3
3,320,247	+				+1.3
3,320,247	+				+0.6
3,320,247	+				-0.7
3,320,247	+				+0.8
3,320,248	-				+1.2
3,320,248	-				-1.3
3,320,248	-				+1.0
3,320,248	-				-1.1
3,320,270	+				+1.6
3,320,270	+				+1.7
3,320,271	-				-0.7
3,320,277	+				+2.3
3,320,277	+				-0.5
3,320,277	+				+2.8
3,320,277	+				-0.1
3,320,278	-				-0.1
3,320,425	+				-0.2
3,320,457	-				-0.2
3,320,457	-				-1.1
3,320,483	-				+0.5
3,320,545	+		HGI48_RS14755	0.11	-0.9
3,320,546	-		HGI48_RS14755	0.11	-1.1
3,320,641	-		HGI48_RS14755	0.19	-0.5
3,320,667	+		HGI48_RS14755	0.21	-2.3
3,320,667	+				+0.5
3,320,667	+		HGI48_RS14755	0.21	-0.5
3,320,667	+		HGI48_RS14755	0.21	+0.3
3,320,667	+		HGI48_RS14755	0.21	-0.5
3,320,667	+		HGI48_RS14755	0.21	-2.1
3,320,668	-		HGI48_RS14755	0.21	-0.4
3,320,668	-		HGI48_RS14755	0.21	+0.3
3,320,668	-		HGI48_RS14755	0.21	-0.6
3,320,668	-		HGI48_RS14755	0.21	-2.0
3,320,668	-		HGI48_RS14755	0.21	-1.1
3,320,668	-				-0.1
3,320,668	-		HGI48_RS14755	0.21	-2.9
3,320,668	-		HGI48_RS14755	0.21	+0.7
3,320,668	-		HGI48_RS14755	0.21	-1.7
3,320,726	+		HGI48_RS14755	0.25	-0.6
3,320,726	+		HGI48_RS14755	0.25	-0.3
3,320,830	-		HGI48_RS14755	0.34	-1.0
3,320,916	+		HGI48_RS14755	0.41	+1.5
3,320,916	+		HGI48_RS14755	0.41	-0.5
3,320,916	+				-0.1
3,320,917	-		HGI48_RS14755	0.41	-0.1
3,320,932	+		HGI48_RS14755	0.42	-0.3
3,320,933	-		HGI48_RS14755	0.42	-0.3
3,320,933	-				+1.5
3,320,975	-		HGI48_RS14755	0.45	+0.3
3,321,000	+		HGI48_RS14755	0.47	-0.1
3,321,001	-		HGI48_RS14755	0.48	-0.5
3,321,136	+		HGI48_RS14755	0.58	-1.5
3,321,136	+		HGI48_RS14755	0.58	+0.9
3,321,137	-		HGI48_RS14755	0.58	-2.1
3,321,148	+		HGI48_RS14755	0.59	-1.3
3,321,243	+		HGI48_RS14755	0.67	+0.0
3,321,244	-		HGI48_RS14755	0.67	-1.5
3,321,244	-		HGI48_RS14755	0.67	-0.3
3,321,244	-		HGI48_RS14755	0.67	-0.3
3,321,259	-		HGI48_RS14755	0.68	+0.5
3,321,428	-		HGI48_RS14755	0.82	+0.5
3,321,440	-		HGI48_RS14755	0.83	+0.1
3,321,440	-		HGI48_RS14755	0.83	+0.1
3,321,476	-		HGI48_RS14755	0.86	-0.6
3,321,538	+				+2.5
3,321,539	-				+1.1
3,321,586	+				-1.5
3,321,587	-				+1.5
3,321,589	+				+0.3
3,321,597	+				-0.5
3,321,597	+				+0.8
3,321,598	-				-1.5
3,321,598	-				+0.2
3,321,598	-				-0.7
3,321,598	-				-1.5
3,321,641	-				-0.3
3,321,652	+				-0.9
3,321,652	+				-0.2
3,321,653	-				+0.0
3,321,653	-				+2.1
3,321,667	-				-0.3
3,321,744	+				-1.3
3,321,744	+				+0.1
3,321,744	+				+0.9
3,321,745	-				+0.1
3,321,745	-				-0.3
3,321,899	+				-1.5
3,321,909	+				-0.9
3,322,017	+				-0.3
3,322,018	-				+0.3
3,322,083	+				-1.1
3,322,083	+				+1.1
3,322,083	+				-0.3
3,322,084	-				+0.1
3,322,084	-				+2.1
3,322,098	+				-0.3
3,322,164	+		HGI48_RS14760	0.11	+0.1
3,322,280	+		HGI48_RS14760	0.25	-0.9
3,322,281	-		HGI48_RS14760	0.25	-2.1
3,322,281	-		HGI48_RS14760	0.25	-0.5
3,322,336	-		HGI48_RS14760	0.31	-2.5
3,322,551	+		HGI48_RS14760	0.56	-0.7
3,322,551	+		HGI48_RS14760	0.56	+0.1
3,322,585	+		HGI48_RS14760	0.60	-0.9
3,322,629	+		HGI48_RS14760	0.65	-0.2
3,322,629	+		HGI48_RS14760	0.65	-0.2
3,322,630	-		HGI48_RS14760	0.65	+0.5
3,322,630	-		HGI48_RS14760	0.65	-0.3
3,322,630	-				+1.2
3,322,630	-		HGI48_RS14760	0.65	+0.3
3,322,630	-		HGI48_RS14760	0.65	-2.1
3,322,630	-		HGI48_RS14760	0.65	+1.3