Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS14480

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,249,976	+		HGI48_RS14475	0.31	-0.3
3,249,977	-		HGI48_RS14475	0.31	-2.7
3,250,000	+		HGI48_RS14475	0.33	-1.1
3,250,001	-		HGI48_RS14475	0.33	-1.4
3,250,062	+		HGI48_RS14475	0.38	-0.8
3,250,123	+		HGI48_RS14475	0.43	-1.3
3,250,124	-		HGI48_RS14475	0.43	+2.1
3,250,124	-		HGI48_RS14475	0.43	-1.4
3,250,124	-		HGI48_RS14475	0.43	-0.1
3,250,186	+		HGI48_RS14475	0.48	+0.1
3,250,354	-		HGI48_RS14475	0.61	-1.6
3,250,514	-		HGI48_RS14475	0.74	-0.6
3,250,531	+		HGI48_RS14475	0.75	+0.1
3,250,531	+		HGI48_RS14475	0.75	-1.9
3,250,531	+		HGI48_RS14475	0.75	+0.3
3,250,531	+		HGI48_RS14475	0.75	-0.9
3,250,531	+		HGI48_RS14475	0.75	-0.1
3,250,531	+				-0.6
3,250,531	+		HGI48_RS14475	0.75	+0.0
3,250,532	-		HGI48_RS14475	0.75	+0.7
3,250,532	-		HGI48_RS14475	0.75	-0.6
3,250,532	-				+0.4
3,250,532	-				-1.1
3,250,670	+		HGI48_RS14475	0.86	-2.0
3,250,692	+		HGI48_RS14475	0.88	-0.3
3,250,692	+		HGI48_RS14475	0.88	-0.8
3,250,716	+		HGI48_RS14475	0.90	-0.4
3,250,717	-		HGI48_RS14475	0.90	+0.4
3,250,749	+				+2.0
3,250,777	+				-1.4
3,250,833	+				+0.4
3,250,841	+				+0.1
3,250,841	+				-0.3
3,250,842	-				-1.3
3,251,429	-		HGI48_RS14480	0.38	+0.7
3,252,271	+				-0.6
3,252,295	-				-1.5
3,252,295	-				-0.0
3,252,295	-				+0.1
3,252,295	-				-0.9
3,252,295	-				-1.0
3,252,295	-				-0.1
3,252,331	+				+0.0
3,252,332	-				-0.6
3,252,332	-				+0.9
3,252,339	+				+0.4
3,252,339	+				-2.9
3,252,340	-				+1.0
3,252,340	-				+0.2
3,252,340	-				+0.4
3,252,340	-				+0.9
3,252,361	+				+0.0
3,252,398	-				+0.4
3,252,405	+				+2.4
3,252,429	-				-0.1
3,252,429	-				+0.0
3,252,837	+		HGI48_RS14485	0.24	-2.6
3,252,838	-		HGI48_RS14485	0.24	-0.6
3,252,838	-		HGI48_RS14485	0.24	+0.5
3,253,031	-		HGI48_RS14485	0.34	+0.8
3,253,116	-				+1.2