Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS14355

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,224,445	+		HGI48_RS14350	0.65	-0.9
3,224,862	-				-1.4
3,224,961	-				-0.4
3,224,963	-				+0.4
3,224,963	-				-2.4
3,225,168	+				+0.4
3,225,168	+		HGI48_RS14355	0.10	-1.6
3,225,169	-		HGI48_RS14355	0.10	+0.2
3,225,169	-		HGI48_RS14355	0.10	-0.8
3,225,169	-		HGI48_RS14355	0.10	-0.2
3,225,173	-		HGI48_RS14355	0.10	+0.4
3,226,321	+		HGI48_RS14355	0.64	-2.7
3,226,350	+		HGI48_RS14355	0.65	-2.7
3,226,354	+		HGI48_RS14355	0.65	-2.1
3,226,354	+		HGI48_RS14355	0.65	-1.6
3,226,603	-		HGI48_RS14355	0.77	-0.6
3,226,720	-		HGI48_RS14355	0.83	-0.6
3,226,730	+		HGI48_RS14355	0.83	-1.6
3,226,938	+				+0.2
3,226,939	-				-0.3
3,227,103	+				-1.7
3,227,132	+				-1.6
3,227,132	+				+0.8
3,227,132	+				-0.3
3,227,132	+				+0.2
3,227,133	-				+2.0
3,227,133	-				+0.4
3,227,133	-				-0.9
3,227,133	-				+0.6
3,227,133	-				+0.2
3,227,133	-				+0.2
3,227,296	+		HGI48_RS14360	0.15	+1.9
3,227,296	+		HGI48_RS14360	0.15	+0.0
3,227,296	+		HGI48_RS14360	0.15	+0.5
3,227,296	+		HGI48_RS14360	0.15	+0.2
3,227,297	-				+1.8
3,227,297	-		HGI48_RS14360	0.15	+0.4
3,227,297	-		HGI48_RS14360	0.15	-0.0
3,227,297	-		HGI48_RS14360	0.15	-2.1
3,227,297	-		HGI48_RS14360	0.15	+0.1
3,227,342	+		HGI48_RS14360	0.22	-0.1
3,227,448	+		HGI48_RS14360	0.40	-0.2
3,227,448	+		HGI48_RS14360	0.40	-0.2
3,227,449	-				+2.0
3,227,497	+		HGI48_RS14360	0.47	+0.4
3,227,497	+		HGI48_RS14360	0.47	+0.3
3,227,685	+				+3.3
3,227,685	+		HGI48_RS14360	0.78	-1.4
3,227,685	+		HGI48_RS14360	0.78	-0.6
3,227,686	-		HGI48_RS14360	0.78	+0.4
3,227,686	-		HGI48_RS14360	0.78	+0.0
3,227,686	-		HGI48_RS14360	0.78	-1.1
3,227,686	-		HGI48_RS14360	0.78	-2.1
3,227,695	+		HGI48_RS14360	0.80	-1.1
3,227,695	+		HGI48_RS14360	0.80	+0.0
3,227,695	+		HGI48_RS14360	0.80	-1.6
3,227,695	+		HGI48_RS14360	0.80	+0.0
3,227,696	-		HGI48_RS14360	0.80	+1.0
3,227,696	-		HGI48_RS14360	0.80	+0.2
3,227,696	-		HGI48_RS14360	0.80	-1.4
3,227,696	-		HGI48_RS14360	0.80	+0.6
3,227,699	+		HGI48_RS14360	0.80	-0.9
3,227,700	-		HGI48_RS14360	0.80	+0.2
3,227,880	+				+0.0
3,227,880	+				-0.0
3,227,880	+				+0.6
3,227,880	+				+0.5
3,227,881	-				-0.3
3,227,881	-				-0.5
3,227,900	-				-0.6
3,227,911	+				+0.6
3,227,912	-				-0.8
3,227,912	-				-1.9
3,227,912	-				-0.6
3,227,936	+				-1.6
3,228,046	+		HGI48_RS14365	0.25	-2.4
3,228,046	+		HGI48_RS14365	0.25	-0.1
3,228,046	+		HGI48_RS14365	0.25	-1.6
3,228,050	+		HGI48_RS14365	0.25	-0.8
3,228,050	+		HGI48_RS14365	0.25	-1.0
3,228,051	-				+1.0
3,228,084	-		HGI48_RS14365	0.32	-1.1