Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS12585

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,750,324	+				-0.3
2,750,324	+				-0.7
2,750,325	-				-1.7
2,750,325	-				+0.2
2,750,387	+				-0.1
2,750,388	-				+0.4
2,750,388	-				-0.1
2,750,446	+		HGI48_RS12580	0.12	-0.7
2,750,446	+		HGI48_RS12580	0.12	+0.3
2,750,446	+		HGI48_RS12580	0.12	+0.1
2,750,446	+		HGI48_RS12580	0.12	+1.3
2,750,446	+		HGI48_RS12580	0.12	-0.4
2,750,447	-		HGI48_RS12580	0.12	-2.0
2,750,447	-		HGI48_RS12580	0.12	-1.4
2,750,447	-		HGI48_RS12580	0.12	+0.0
2,750,447	-		HGI48_RS12580	0.12	-0.4
2,750,483	+		HGI48_RS12580	0.17	+0.3
2,750,483	+		HGI48_RS12580	0.17	+1.5
2,750,484	-		HGI48_RS12580	0.17	+0.1
2,750,486	+		HGI48_RS12580	0.17	-1.2
2,750,487	-		HGI48_RS12580	0.18	+0.7
2,750,666	+		HGI48_RS12580	0.41	-1.7
2,750,700	-		HGI48_RS12580	0.45	+0.2
2,750,802	+				+1.8
2,750,802	+		HGI48_RS12580	0.59	-0.6
2,750,802	+		HGI48_RS12580	0.59	-0.7
2,750,802	+				+1.3
2,750,940	+		HGI48_RS12580	0.77	-0.8
2,750,940	+		HGI48_RS12580	0.77	-2.0
2,751,029	-		HGI48_RS12580	0.88	+0.0
2,751,099	+				+0.9
2,751,099	+				+0.9
2,751,100	-				-0.1
2,751,114	-				-0.7
2,751,114	-				-0.7
2,751,128	+				+0.4
2,751,128	+				+0.7
2,751,129	-				+0.1
2,751,129	-				-2.2
2,751,151	+				-0.7
2,751,151	+				-1.5
2,751,152	-				+0.1
2,751,152	-				+0.5
2,751,152	-				+0.3
2,751,152	-				+0.5
2,751,273	+				-0.2
2,751,273	+				-2.7
2,751,273	+				-0.7
2,751,273	+				-1.2
2,752,534	-		HGI48_RS12590	0.26	+1.1
2,752,572	-		HGI48_RS12590	0.39	-0.1
2,752,572	-		HGI48_RS12590	0.39	+0.5
2,752,667	+		HGI48_RS12590	0.69	-1.6
2,752,667	+		HGI48_RS12590	0.69	-1.6
2,752,667	+		HGI48_RS12590	0.69	-0.1
2,752,678	-		HGI48_RS12590	0.73	+0.2
2,752,678	-		HGI48_RS12590	0.73	-1.0
2,752,680	+		HGI48_RS12590	0.73	-1.5
2,752,680	+		HGI48_RS12590	0.73	-0.6
2,752,681	-		HGI48_RS12590	0.74	-1.6
2,752,714	+		HGI48_RS12590	0.84	-2.6
2,752,754	+				-1.2
2,752,754	+				-0.4
2,752,755	-				-1.2
2,752,755	-				+1.1
2,752,755	-				-0.3
2,752,755	-				+0.1
2,752,827	-				+0.8
2,752,827	-				+0.0
2,752,909	-				+0.4
2,752,909	-				-1.8
2,752,921	+				-0.4
2,752,921	+				-0.0
2,752,922	-				+1.1
2,752,922	-				-0.3
2,752,922	-				+0.3
2,752,935	+				-1.5
2,752,936	-				-0.6
2,752,936	-				-1.2
2,752,936	-				-0.1
2,752,936	-				-0.4
2,752,936	-				-0.7
2,752,936	-				+0.4
2,753,052	-				+1.6
2,753,060	+				+0.3
2,753,060	+				-0.1
2,753,061	-				+0.9
2,753,101	+		HGI48_RS12595	0.12	-0.2
2,753,104	+		HGI48_RS12595	0.12	-2.2
2,753,104	+		HGI48_RS12595	0.12	+0.3
2,753,104	+		HGI48_RS12595	0.12	-0.3
2,753,104	+		HGI48_RS12595	0.12	-1.3
2,753,105	-		HGI48_RS12595	0.12	-0.9
2,753,105	-		HGI48_RS12595	0.12	-1.1
2,753,105	-		HGI48_RS12595	0.12	-0.7
2,753,105	-				+1.3
2,753,105	-		HGI48_RS12595	0.12	-1.2
2,753,276	+		HGI48_RS12595	0.32	+0.3
2,753,280	+		HGI48_RS12595	0.33	-1.7
2,753,296	+		HGI48_RS12595	0.35	-0.8
2,753,296	+		HGI48_RS12595	0.35	-0.7
2,753,297	-		HGI48_RS12595	0.35	+1.0
2,753,297	-		HGI48_RS12595	0.35	-0.8
2,753,297	-		HGI48_RS12595	0.35	+1.7
2,753,436	+		HGI48_RS12595	0.51	-1.1
2,753,436	+		HGI48_RS12595	0.51	+0.8