Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS11990

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,612,560	+		HGI48_RS11980	0.82	-0.0
2,612,560	+		HGI48_RS11980	0.82	+0.3
2,612,561	-		HGI48_RS11980	0.82	-1.0
2,612,561	-		HGI48_RS11980	0.82	-0.4
2,612,561	-		HGI48_RS11980	0.82	-0.1
2,612,584	+		HGI48_RS11980	0.84	-0.1
2,612,584	+		HGI48_RS11980	0.84	+0.3
2,612,599	+		HGI48_RS11980	0.86	+0.2
2,612,599	+		HGI48_RS11980	0.86	+0.3
2,612,604	+		HGI48_RS11980	0.86	+0.3
2,612,605	-		HGI48_RS11980	0.86	-0.3
2,612,607	+		HGI48_RS11980	0.87	+0.3
2,612,607	+		HGI48_RS11980	0.87	-1.0
2,612,607	+		HGI48_RS11980	0.87	-0.1
2,612,607	+		HGI48_RS11980	0.87	+0.9
2,612,693	+				-0.7
2,612,740	+				-1.3
2,612,741	-				-1.0
2,612,767	+				-2.7
2,612,767	+				-0.5
2,612,963	-				-0.5
2,612,969	-				-1.0
2,612,977	-				+0.3
2,612,977	-				-0.9
2,612,991	-				-0.7
2,612,991	-				-1.1
2,612,993	-				-0.9
2,613,017	+				-0.7
2,613,017	+				-0.8
2,613,021	-				-3.1
2,613,021	-				-2.0
2,613,021	-				-1.3
2,613,023	-				+0.8
2,613,026	-				+0.1
2,613,026	-				+0.2
2,613,045	-				-0.1
2,613,062	+				+1.1
2,613,062	+				+0.7
2,613,063	-				-0.4
2,613,063	-				+0.3
2,613,063	-				+0.5
2,613,063	-				-1.3
2,613,096	+				-0.4
2,613,097	-				+0.7
2,613,116	+				-0.8
2,613,116	+				-0.6
2,613,116	+				-0.1
2,613,116	+				-1.5
2,613,117	-				-0.7
2,613,117	-				-1.7
2,613,117	-				+0.3
2,613,156	-				-1.3
2,613,167	+				-2.0
2,613,168	-				-0.5
2,613,199	-				+3.6
2,613,233	-				-0.1
2,613,253	+				+0.1
2,613,253	+				+0.1
2,613,254	-				-3.0
2,613,254	-				-0.8
2,613,254	-				-1.1
2,613,254	-				+0.1
2,613,323	+				+0.9
2,613,323	+				+0.9
2,613,323	+				-0.0
2,613,323	+				+1.0
2,613,323	+				+1.0
2,613,323	+				-0.1
2,613,324	-				+0.1
2,613,324	-				-0.0
2,613,330	-				-0.2
2,613,330	-				-0.4
2,613,453	+				+0.8
2,613,454	-				+0.5
2,613,454	-				-0.6
2,613,468	+				+0.8
2,613,468	+				+1.4
2,613,469	-				+0.1
2,613,469	-				-0.4
2,613,472	-				+0.3
2,613,494	+				-0.0
2,613,494	+				+0.6
2,613,495	-				-0.7
2,613,495	-				+0.9
2,613,495	-				+0.5
2,613,495	-				-0.3
2,613,541	+				+0.2
2,613,542	-				-0.1
2,613,542	-				-0.9
2,613,542	-				+1.1
2,613,542	-				-1.3
2,613,543	+				-0.5
2,613,550	+				+0.3
2,613,551	-				-0.5
2,613,551	-				-0.1
2,613,551	-				-1.0
2,613,840	+		HGI48_RS11990	0.24	+0.1
2,613,892	+				+0.3
2,613,894	+		HGI48_RS11990	0.29	-0.0
2,613,894	+		HGI48_RS11990	0.29	+0.3
2,613,895	-		HGI48_RS11990	0.29	+0.3
2,613,895	-		HGI48_RS11990	0.29	+0.3
2,613,895	-		HGI48_RS11990	0.29	+1.4
2,613,895	-				+1.6
2,613,895	-		HGI48_RS11990	0.29	-0.4
2,613,895	-		HGI48_RS11990	0.29	-0.3
2,613,930	+		HGI48_RS11990	0.32	+0.6
2,613,967	+				-1.3
2,613,978	+		HGI48_RS11990	0.36	+0.6
2,613,999	-		HGI48_RS11990	0.38	+0.3
2,614,100	+		HGI48_RS11990	0.47	-1.5
2,614,100	+		HGI48_RS11990	0.47	-0.5
2,614,100	+		HGI48_RS11990	0.47	+1.4
2,614,101	-		HGI48_RS11990	0.47	-0.4
2,614,101	-		HGI48_RS11990	0.47	-2.0
2,614,101	-		HGI48_RS11990	0.47	-0.0
2,614,101	-		HGI48_RS11990	0.47	+0.3
2,614,104	+		HGI48_RS11990	0.47	-1.0
2,614,104	+		HGI48_RS11990	0.47	+0.1
2,614,104	+		HGI48_RS11990	0.47	-2.5
2,614,104	+		HGI48_RS11990	0.47	+0.1
2,614,104	+		HGI48_RS11990	0.47	+0.5
2,614,104	+		HGI48_RS11990	0.47	+0.9
2,614,104	+		HGI48_RS11990	0.47	-1.0
2,614,104	+				-0.7
2,614,104	+		HGI48_RS11990	0.47	-1.2
2,614,104	+		HGI48_RS11990	0.47	-0.5
2,614,104	+		HGI48_RS11990	0.47	-0.9
2,614,104	+		HGI48_RS11990	0.47	-0.4
2,614,105	-		HGI48_RS11990	0.47	-0.2
2,614,105	-		HGI48_RS11990	0.47	+0.7
2,614,105	-		HGI48_RS11990	0.47	+0.2
2,614,105	-		HGI48_RS11990	0.47	-0.3
2,614,105	-		HGI48_RS11990	0.47	-0.7
2,614,105	-		HGI48_RS11990	0.47	-2.3
2,614,353	+		HGI48_RS11990	0.69	-1.3
2,614,353	+		HGI48_RS11990	0.69	-0.3
2,614,354	-		HGI48_RS11990	0.69	-2.3
2,614,354	-				+1.5
2,614,354	-		HGI48_RS11990	0.69	+0.8
2,614,518	+		HGI48_RS11990	0.83	+0.7
2,614,518	+		HGI48_RS11990	0.83	-0.4
2,614,518	+		HGI48_RS11990	0.83	+0.6
2,614,519	-		HGI48_RS11990	0.83	-2.3
2,614,536	+		HGI48_RS11990	0.85	-0.3
2,614,536	+		HGI48_RS11990	0.85	+0.1
2,614,537	-		HGI48_RS11990	0.85	+0.8
2,614,537	-		HGI48_RS11990	0.85	-2.7
2,614,540	-		HGI48_RS11990	0.85	-0.7
2,614,540	-		HGI48_RS11990	0.85	-0.4
2,614,540	-		HGI48_RS11990	0.85	-0.6
2,614,540	-		HGI48_RS11990	0.85	+0.2
2,614,656	-				+0.1
2,614,692	+				-0.9
2,614,693	-				+0.3
2,614,693	-				-0.8
2,614,708	+				-1.1
2,614,708	+				+1.9
2,614,708	+				-1.7
2,614,708	+				-0.3
2,614,708	+				-0.7
2,614,709	-				-0.3
2,614,709	-				-0.3
2,614,709	-				-0.4
2,614,728	-				-0.0
2,614,728	-				+1.1
2,614,738	-				-2.0
2,614,742	+				-2.5
2,614,743	-				-0.4
2,614,753	+				+0.7
2,614,753	+				-0.3
2,614,754	-				-0.8
2,614,837	+				+0.5
2,614,837	+				-0.7
2,614,874	-				+0.0
2,614,881	+				-1.3
2,614,882	-				+0.6
2,614,882	-				+0.9
2,614,939	+				+0.6
2,614,939	+				-0.4
2,614,943	+				+0.9
2,614,943	+				-1.7
2,614,943	+				-0.3
2,614,943	+				+0.5
2,614,943	+				-0.2
2,614,943	+				-0.1
2,614,944	-				-2.4
2,614,944	-				+0.7
2,614,944	-				-0.7
2,614,963	+				-0.0
2,614,966	+				+0.7
2,614,966	+				+0.4
2,614,966	+				+2.6
2,614,966	+				-0.4
2,614,976	-				-0.1
2,614,994	-				-0.2
2,615,023	+				+1.6
2,615,029	+				+0.1
2,615,029	+				-0.0
2,615,029	+				-0.3
2,615,030	-				-1.7
2,615,030	-				+0.0
2,615,055	+		HGI48_RS11995	0.12	-0.3
2,615,056	-		HGI48_RS11995	0.12	+0.5
2,615,077	+		HGI48_RS11995	0.16	-0.7
2,615,077	+				+0.7
2,615,077	+		HGI48_RS11995	0.16	-1.7
2,615,114	+		HGI48_RS11995	0.22	-0.8
2,615,115	-		HGI48_RS11995	0.22	+0.0
2,615,115	-		HGI48_RS11995	0.22	-0.6
2,615,305	+		HGI48_RS11995	0.56	-0.5
2,615,305	+		HGI48_RS11995	0.56	-0.4
2,615,305	+		HGI48_RS11995	0.56	+0.3
2,615,378	+		HGI48_RS11995	0.69	-0.7
2,615,394	+		HGI48_RS11995	0.72	-1.3
2,615,394	+		HGI48_RS11995	0.72	+0.1
2,615,394	+		HGI48_RS11995	0.72	+0.3
2,615,394	+		HGI48_RS11995	0.72	-0.1
2,615,394	+		HGI48_RS11995	0.72	-0.4
2,615,394	+		HGI48_RS11995	0.72	+0.5
2,615,395	+		HGI48_RS11995	0.72	+0.6
2,615,396	+		HGI48_RS11995	0.73	-1.7
2,615,396	+		HGI48_RS11995	0.73	-1.8
2,615,396	+		HGI48_RS11995	0.73	+0.9
2,615,397	-		HGI48_RS11995	0.73	+0.3
2,615,505	+				+0.7
2,615,505	+				-0.1
2,615,506	-				+0.7
2,615,622	+				-1.7
2,615,622	+				+1.1
2,615,661	+				-0.3
2,615,683	+				+1.4
2,615,683	+				+0.3
2,615,683	+				+0.3
2,615,683	+				-2.5
2,615,684	-				-1.3