Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS11095
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,404,064 | - | HGI48_RS11090 | 0.42 | -1.3 | |
2,404,152 | + | HGI48_RS11090 | 0.62 | +1.3 | |
2,404,179 | - | HGI48_RS11090 | 0.68 | +2.2 | |
2,404,184 | - | HGI48_RS11090 | 0.69 | -0.0 | |
2,404,184 | - | HGI48_RS11090 | 0.69 | -0.1 | |
2,404,241 | - | HGI48_RS11090 | 0.82 | +0.8 | |
2,404,264 | - | HGI48_RS11090 | 0.88 | +0.6 | |
2,404,293 | + | -0.1 | |||
2,404,294 | - | +1.3 | |||
2,404,350 | + | +0.1 | |||
2,404,357 | + | +0.6 | |||
2,404,357 | + | -0.5 | |||
2,404,358 | - | +0.3 | |||
2,404,383 | + | +0.3 | |||
2,404,383 | + | -0.1 | |||
2,404,384 | - | +1.2 | |||
2,404,480 | + | +0.5 | |||
2,404,518 | - | +1.4 | |||
2,404,746 | + | -1.7 | |||
2,404,746 | + | -2.0 | |||
2,404,760 | + | -2.2 | |||
2,404,760 | + | -1.3 | |||
2,404,761 | - | +1.6 | |||
2,404,761 | - | +1.3 | |||
2,404,761 | - | +0.3 | |||
2,404,798 | - | +1.0 | |||
2,404,826 | + | -0.7 | |||
2,404,827 | - | +0.9 | |||
2,404,924 | + | -1.1 | |||
2,404,925 | - | -0.1 | |||
2,404,925 | - | -1.7 | |||
2,405,022 | - | -2.3 | |||
2,405,031 | + | +0.2 | |||
2,405,031 | + | +0.6 | |||
2,405,032 | - | -0.2 | |||
2,405,032 | - | -0.1 | |||
2,405,098 | + | +0.6 | |||
2,407,059 | - | -1.0 |
Or see this region's nucleotide sequence